Gene Elen_2653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2653 
Symbol 
ID8416979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3071466 
End bp3073361 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content67% 
IMG OID645025632 
Productflavocytochrome c 
Protein accessionYP_003182993 
Protein GI257792387 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01813] flavocytochrome c 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.123058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGA ACCCGAACGA AATCGCCGCC CGCCAGCGTA TGGAAGAAGC CATGAGTCGC 
ATCGAGGCGA ACGTGCGCAC GCGCCTGCAG ATGAACCGCC GCCAGTTCGT CTGCGGCAGC
GCCGCAACCA TGGCGTTGGC CATGCTCGGC CTGGCCGGCT GCTCGCCGAA GGCCGACGCG
AACGGCGGCG TGGGCTCGCA GGCGTACAAA GCCGGCACCT ACGAGGCCAG CGCCGAGGGC
CGCAACGGCG CCGTCAACGT GAAGGTCACG TTCACCGACG ACGCTATCGA CGCCATCGAT
GTCGAGCACG AGGAAAGCCG CAACATCGGC GATGCCGCCA TCGATATCCT CAAGGACAAG
TATCTCCAGT CGCAAAGCCT CAACTTCGAC ACCGTCACGG GCGCTTCGCT GTCGTCCATG
GCCTTCGCCA CGGCCGTGGC CGAGTGCGTC GACCAGGCGG GCGGCGACGT GAAGGCCCTC
AAGAAGGCCG ACACGGGCAT CGAGCCCGCG GCCGCTATCG ACGAAGACTG CGACGTGTGC
GTCGTGGGCT CCGGCGGCGC GGCGTTCGCG GCGGCCGTCA CCGCGGCGGA GGCCGGCAAG
ACGGTGGTCA TGCTGGAGAA GATGGACATC TACGGCGGCA ACACGAACGC CGGCGAGGGC
ACGCTCAACG CGCCCGACCC CGAGCGTCAA GAGCCCCTCG GCATCGAGGA TTCGCCTGAC
CTGTTCTACC AGCAGACGTT CGAAGGCGGC GACGAGTTGG GCGATCCCGC GCTCGTGCGC
ATCCTGGCCG ACAACGCGCT GGACGCCGTG CACTGGATGG AGGACCACGG CCTGGTGTAC
GAGAAGGAAC CGTTCACGGC CATCGGCGGC CTATGGCAGC GCGGTCACGC CGTCGAGGTG
GAGAAGAAGG GCGAGCAGGG CGGCAGCTAC TACGTGTCGT GCCTGAAGGA CAGCGCCGAC
AAGACCGGCA AGGTCACGCT GTACACCGAC GCGAAGGTCG AACAGCTTGT CGAGGAAGGC
GGCAAGGTGA CGGGCGTCGC CGGAACCCGT CCTTCGAGCG GCGCTTCCAT TGCCGTGCGC
GCGAAGTCCG TGGTGTTGGC CACGGGTGGC TACTCCCGCA ACGCCGAGCT GGCCATGGAG
TACGACAAGC GCGTGACGAA GGACATGCCC TCGTCGAATG TGTGCTCGTC TACCGGTGAC
GGCCTGGGAT TGGGCGAAGG CGTGGGCGCG GGTCTGCGCA ACATGGAGCT GGTGCAGATC
CACCCGCTGG GCGACCCGCA GAACGGCGGC GTGGCCACGT TCGTGGGCAA CTGGCTGGGC
GTCGAGGACT ACGTGATGGT CAACGACGAG GGCAAGCGAT TCATCCGCGA GGACGAGCGC
CGCGACACCA TCGCCGACGC CATCCTCGAA CAGCCCAACG ACGAGATGTG GCTGCTCGTG
GACTCCACCG ACATCGCGGC CGACCGCGCC GACCAGATCG CCGAGCTGGT GGAGAAGGGC
CATAGCTTCA AGGCCGACGA CATCGAAGAT CTGGCGAACC AGATCGGCGT CCCGGCTGAT
GCGCTGGCCG AGACGGTGGA GGGCTACAAC GCCTGCGTGA AGGCCGGCGT CGACACGCAG
ATCGCCCCAG GCAAGGAGCT GCTGGGCACC GAGCTGTCCG ATCCCGCGTA TTACGCCTCC
AAGCGCATCC CCACCATCCA CTACACTATG GGCGGCTTGT GCATCACTAC CGACGCGCAG
GTGTGCACCG AGGCGGGCGA ACCCATCCCC AACCTGTTCG CGTGCGGCGA AGTCACCGGC
GGCGTCCAGG GCGGCAACCG TCTGGGCGGC AACTCGTTCA CCGACCTCAT CGTGTTCGGC
CGCATCGCCG GAGCCTCGGC GGTGGCGAAC GCCTAA
 
Protein sequence
MIQNPNEIAA RQRMEEAMSR IEANVRTRLQ MNRRQFVCGS AATMALAMLG LAGCSPKADA 
NGGVGSQAYK AGTYEASAEG RNGAVNVKVT FTDDAIDAID VEHEESRNIG DAAIDILKDK
YLQSQSLNFD TVTGASLSSM AFATAVAECV DQAGGDVKAL KKADTGIEPA AAIDEDCDVC
VVGSGGAAFA AAVTAAEAGK TVVMLEKMDI YGGNTNAGEG TLNAPDPERQ EPLGIEDSPD
LFYQQTFEGG DELGDPALVR ILADNALDAV HWMEDHGLVY EKEPFTAIGG LWQRGHAVEV
EKKGEQGGSY YVSCLKDSAD KTGKVTLYTD AKVEQLVEEG GKVTGVAGTR PSSGASIAVR
AKSVVLATGG YSRNAELAME YDKRVTKDMP SSNVCSSTGD GLGLGEGVGA GLRNMELVQI
HPLGDPQNGG VATFVGNWLG VEDYVMVNDE GKRFIREDER RDTIADAILE QPNDEMWLLV
DSTDIAADRA DQIAELVEKG HSFKADDIED LANQIGVPAD ALAETVEGYN ACVKAGVDTQ
IAPGKELLGT ELSDPAYYAS KRIPTIHYTM GGLCITTDAQ VCTEAGEPIP NLFACGEVTG
GVQGGNRLGG NSFTDLIVFG RIAGASAVAN A