| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2542 |
|---|
| Symbol | |
|---|
| ID | 8416866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 2974093 |
|---|
| End bp | 2975982 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645025523 |
|---|
| Product | acetyl-CoA carboxylase, biotin carboxyl carrier protein |
|---|
| Protein accession | YP_003182886 |
|---|
| Protein GI | 257792280 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
|---|
| TIGRFAM ID | [TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.332084 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGGC TTCAGATCAT GGATACCACC ATCCGTGACG GCCAGCAAAG CCTCTGGGCC
ACGCGCATGC AGATCGGCGA TATGCTGCCG ATCCTGCCTA AAATGGACCG TGTCGGGTAC
TGGGCCATCG AGGCGTGGGG CGGTGCGACG TTTGACACGT GCATGCGCTT CCTCGACGAG
AACCCGTGGG AGCGACTGCG ATCTATCAAG GCGCAGACGC CGAACACGCC GCTCTCGATG
CTGTCCCGCG GTCAGAACTT GGTGGGGTAC AAGCACTATT CGCGCGACAT CTGCAATCAT
TTCATCAAGG CCGCGAAGCG CAATGGCGTG CATGTCTTCC GCGTGTTCGA CGCGCTCAAC
GACATCCGCA ACGTCGTCGA CAACGCCGAA GCCATCAAGG AATGCGGCGG CCACTTCGAA
GGAGCCATCT CCTACACGAT GTCGCCGGTC CACACGCTCG ACAGCTTCCT CGACTACGGT
CAGAAGCTCA AGGACCTCGG TGCCGACTCC ATCTGCATCA AGGACATGGC GGGCATGCTC
ACGCCGTACC GCACCGAGCG CATGGTGAAG GCCTTCAATG CCGAAATCGG TTTGCCGCTG
CACATCCATT GCCACTACGT CGGCGGCATG GCTCCCGCCA ACATCCTCAA GGCCGCCGAA
GCCGGCGCCG CCATCGCCGA CACGGCCCAT GCGCCGCTGG CGTTCGGCAA CTCGCACCCG
GCCGTCGAGA TGATCGTCGC CGCGCTCCAG GAGAGCCGTT ACGACACCGG CCTCGACCTC
GATCTCTTGT TCGAGATCGC CGAGTACTGG GAAGGCGTGC GCAAGCGCGG CCACTACAAG
CGCGGCGTCT CGTCGCTCAC GCACATGCAG GTGTACTCGC ACCAGGTGCC GGGCGGCATG
ATGTCGAACC TCGTGTCGCA GCTGGAAATC CAGAACGCGG CCGACCGCCT GCCCGAGGTC
ATGAAGGAGA TCCCGAAGGT GCGCGCCGAG GTGGGCTACC CGCCGCTCGT CACGCCGATG
TCGCAGATCG TGGGCACGCA GGCCGTGTTC AACGTGCTCA CCGGCAAGCG TTGGAGCGTC
GTGTCCAAGG AGATGAAGGA TTACATCTGC GGGTACTACG GCAAGGCGCC GGGCCGCATG
GACAAGGACA TCGTGGCGAA GGTCGTGGGC AACTCCGAGA TGCTGCCGCC CGACGTGGCG
CCCGGCTCGC TCGTCACCAC CACCTACGCG CAGGTCGAAG AAGAGATCGG CGACCTTGCG
AAGAGCGAGG AAGACGTGCT CATGTACGCC CTGTTCCCGA ACGAGGCGCG CACGTTCCTC
AGCAAGCACC GGACATCGGA GAAGGTCGAC TTCCTCATGG AGCAGGAGTC GAGCCACACC
AAGGAGGACG ATTACGTGGA CATCAATCAG ATTCGCGAGC TGGTTCGCGT CGCCGAGGAA
AGCGGCGTCG GCGAGATCGT AGTTGAGGAA GAGGGCACCC GCATCGCCGT GCGCATGCCG
GGCACCCTGT CCTCCGAAGC CGCCGCCGCT GCCGCCGCCG CTCCGGTTGC CGCTGTGGCC
CCGGCTCCGG CAGCCGCCGC TCCTGCCGCC GCAGCGGACG ACGTCGAGCG CCCCTCCGAC
TGGTACGCCG TCACGGCTCC CATGGTGGGC ACGTTCTACG CGTCCCCCGC GCCGGGCGAG
CCTCCGTTCG TGCAGGTGGG CGACGAGGTT GCCGCCAACC AGACGCTGTG CATCGTCGAG
GCCATGAAGC TCATGAACGA GATCGCAGCC GAGGAGATGG GCACCGTCCG CGAGGTGTGC
CTCGAGGACG CGTCCCCCGT CGAGTTCGGC ACGGTGCTGT TCTACGTCGA GCCGCACGGC
GCCCCGGCCC CGGCCCCGGA GACGGCGTAA
|
|---|
| Protein sequence | MPRLQIMDTT IRDGQQSLWA TRMQIGDMLP ILPKMDRVGY WAIEAWGGAT FDTCMRFLDE
NPWERLRSIK AQTPNTPLSM LSRGQNLVGY KHYSRDICNH FIKAAKRNGV HVFRVFDALN
DIRNVVDNAE AIKECGGHFE GAISYTMSPV HTLDSFLDYG QKLKDLGADS ICIKDMAGML
TPYRTERMVK AFNAEIGLPL HIHCHYVGGM APANILKAAE AGAAIADTAH APLAFGNSHP
AVEMIVAALQ ESRYDTGLDL DLLFEIAEYW EGVRKRGHYK RGVSSLTHMQ VYSHQVPGGM
MSNLVSQLEI QNAADRLPEV MKEIPKVRAE VGYPPLVTPM SQIVGTQAVF NVLTGKRWSV
VSKEMKDYIC GYYGKAPGRM DKDIVAKVVG NSEMLPPDVA PGSLVTTTYA QVEEEIGDLA
KSEEDVLMYA LFPNEARTFL SKHRTSEKVD FLMEQESSHT KEDDYVDINQ IRELVRVAEE
SGVGEIVVEE EGTRIAVRMP GTLSSEAAAA AAAAPVAAVA PAPAAAAPAA AADDVERPSD
WYAVTAPMVG TFYASPAPGE PPFVQVGDEV AANQTLCIVE AMKLMNEIAA EEMGTVREVC
LEDASPVEFG TVLFYVEPHG APAPAPETA
|
|---|
| |