| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2537 |
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| Symbol | |
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| ID | 8416861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Eggerthella lenta DSM 2243 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013204 |
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| Strand | - |
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| Start bp | 2969638 |
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| End bp | 2971515 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645025518 |
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| Product | deoxyxylulose-5-phosphate synthase |
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| Protein accession | YP_003182881 |
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| Protein GI | 257792275 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGC GTATTCTCGA TATCGTGTCG TCCCCTGCCG ACCTGAAGCT GCTTACGAAC
GAGGAGCTGT CCATCCTCGC GCAGGAAGTG CGCGAGGAGA TCATCACGAC GGCGTCCGAA
ACGGGCGGGC ATGTGGCTTC GTCGCTCGGC GCGGTGGAGA TCATCCTGGC CGTGCACAGC
ATGATGGACT GCCCGCACGA CAAGATCGTG TTCGACGTGG GCCACCAGGC CTACGCGCAC
AAGCTGATCA CCGGGCGTCT CGACGAGTTT CGCACGTTGC GCACGTACGG CGGTCTGTCC
GGCTTCCCGA AGCCCGACGA GAGCCCCTAC GACGTGCACC CGTCCGGCCA TGCCTCCGAC
TCCCTGTCGG TGGCGCTCGG CTTGGCCGAG GCGCGCGAGC TGCGCGGCAG CGACGAGAAG
ATCGTGGCCG TCATCGGCGA TGCGGCCCTG TCGGGCGGCA TGGCGTTCGA GGCGCTCAAT
CACATCGGCC AAGCTCAGAC GCCCATGGTG ATCATTCTCA ACGACAACGA GATGTCCATC
TCGCGCAACG TGGGCGCGCT CATGAAGCAC CTCGGCTACA TGCGCGCCAC CCCGCAGTAC
CGCCAGACCC GTGACTCCGT GCAGGAGGCG CTCGAAAGCA GCGGCGCGTT CGGCAACGCG
TTGGCGAATT TCGGGCGCAA CATGAAAGAG TCGATGAAGC AGTTCGTCAT CCCGCGCACG
ATGATCTTCG AGCAGCTCGG CATCATCTGC ACGGCGCCCA TCGACGGTCA CGATATCGGT
CTGCTCAAGG AGACGCTGGC AACCGTGCTG CACACCGACG TGCCCGTGCT CATGCACGTG
GTCACGCGCA AGGGCGCGGG CTACGCGCCC GCGGTGCAGA ACCCTGAGAA GTTCCACGGC
ATCGCGCCGT TCGAAATCGC CACGGGGGAT GTGAAAAAGA AGCCGTCCGC CGCGCCTTCG
TACACGAGCG TGTTCGGCAA GGCGTTGGCC GCCGAGGCTC GTCGCGATGA TCGCATCGTG
GCCATCACGG CAGCCATGAA GGGCGGCACG GGCCTCGATG CGTTCGCCGA GGAGTTCCCC
GAGCGTTTCG TGGACGCCGG CATCGCCGAG GAACATGCGG TGGGCCTGGC CAGCGGTTTG
GCGACGGGCG GCATGAAGCC GGTCGTGGCC CTGTACTCCA CGTTCCTCCA GCGCGCCATC
GACCAGGTGA TCATCAACAA CGCCCTGCCG AATCTCGACG TGGTGTTCGC CATCGACCGT
GCCGGCATCG TGGGCGAGGA CGGCCCCACG CACCACGGCA TGTTCGATCT CGCCTACATG
CGCATGATCC CGCATATGCG GGTACTTGCC CCCTCTGACG AAGCCGAGCT CGTGCATGCG
TTGCATACGG CGCTCGAGCT GGGCGGCCCC TTCGCCATCC GCTATCCGCG CGGGGCGGCC
GAAGGCGTCG CGCTGCCTGA CGAGCCGCAC GTGCTGGAAG AGGGGAGGGC GCGCGTGATC
CGCGAAGGCG ACGACGTGGC CATCCTCGCG TTCGGACGCA TGGTGTCGCG CGCCAAGGAA
GCGGCGGCGC TGCTCGCCGT GCGCGGCATC GACGCGCGCG TGGTGGACAT GCGCTGGGTC
AAGCCGCTCG ACGTGGACGA GATCGCCCGC GCGGCGCAGA CGAAGCTCGT CGTGACGGTG
GAGGGCGGCA TCATTTCCGG CGGCGTGGGC GAAGGCGTGC TGAACGAGCT GGCTCGTCAA
GGAGCCGCCG TCCCGGCGCT GACGCTGGGC ATCCCCGACA CGTTCGTGCC CCAAGGCTCC
TCGAACCAGC TGCTGCACGA CCTCGGCCTT GATGCGGAAG GCATTGCCGA TGCCGTAGAG
CAGCGTCTCG CTCGCTGA
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| Protein sequence | MDKRILDIVS SPADLKLLTN EELSILAQEV REEIITTASE TGGHVASSLG AVEIILAVHS
MMDCPHDKIV FDVGHQAYAH KLITGRLDEF RTLRTYGGLS GFPKPDESPY DVHPSGHASD
SLSVALGLAE ARELRGSDEK IVAVIGDAAL SGGMAFEALN HIGQAQTPMV IILNDNEMSI
SRNVGALMKH LGYMRATPQY RQTRDSVQEA LESSGAFGNA LANFGRNMKE SMKQFVIPRT
MIFEQLGIIC TAPIDGHDIG LLKETLATVL HTDVPVLMHV VTRKGAGYAP AVQNPEKFHG
IAPFEIATGD VKKKPSAAPS YTSVFGKALA AEARRDDRIV AITAAMKGGT GLDAFAEEFP
ERFVDAGIAE EHAVGLASGL ATGGMKPVVA LYSTFLQRAI DQVIINNALP NLDVVFAIDR
AGIVGEDGPT HHGMFDLAYM RMIPHMRVLA PSDEAELVHA LHTALELGGP FAIRYPRGAA
EGVALPDEPH VLEEGRARVI REGDDVAILA FGRMVSRAKE AAALLAVRGI DARVVDMRWV
KPLDVDEIAR AAQTKLVVTV EGGIISGGVG EGVLNELARQ GAAVPALTLG IPDTFVPQGS
SNQLLHDLGL DAEGIADAVE QRLAR
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