Gene Elen_2520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2520 
Symbol 
ID8416844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand- 
Start bp2948541 
End bp2949599 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content67% 
IMG OID645025501 
ProducttRNA(5-methylaminomethyl-2-thiouridylate)- methyl transferase 
Protein accessionYP_003182864 
Protein GI257792258 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.72514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGA GCGGGCGCAT TGCGCTCGGA ATGAGCGGTG GGGTGGACAG CGCGGTTTCT 
GCAGCGCTGC TCATGCGCGC CGGGTACGAG GTGGTGGGCG TCACGTGCCG CTTTCGCGAC 
AACGCTGCCA CCGAGCGCGC GGCGGCCGAT GCGGCGGCCG TGTGCTCCCA GTTGGGCATC 
CGCCACGAGG CGCCGGGGTG CGTGGGCGAG TTCGAACGCT GCGTGGTGGA GCCGTTCGTC 
TCGTCGTACG CGGCGGGCCT CACGCCTAGT CCGTGCGTGG GTTGCAACGC GCGGTGCAAG 
ATGCCCGCGC TCGTGCGGGT AGCCGGCGAA CTGGGGTGCG ACCGCATCGC CACGGGCCAC 
TACGCGCGCA TTGCCCGCCT GTCCGATTCG GGGCGCTTCG TGGTGAAGCG AGCCCTGGAT 
GCGCGCAAGG ACCAAAGCTA CATGCTTTCG CTGTTGAGCC AGGAGCAGCT GGCGCGCCTC 
GTGTTGCCGC TGGGGGCCAT GACGAAGGCG GAGGTGCGTG TGATCGCGGC CGATCTGGGC 
CTGGTCGTGG CCGAGAAGGC CGAAAGCCAA GACAACTGCT TCATCGAGGG CGACTACCGT 
CCGTTTCTGC GCGCGCGTGG CGTGGAAGAC GCGCCTGGGG ACATTGTGGA TCGCATGGGG 
AATGTGCTCG GCTGCCACGA GGGGCTGGCG AACTACACGG TGGGACAGCG CAAGGGCATC 
GGCGTGGCAG GCCCCGAGCC GTACTACGTG GTGGAGAAGC GCGTCGAAAC CCGCGAACTC 
GTGGTGGGTT TTGCCGACGA GACGCTCATC GGCTCCGTCG TGGTGGGCGG GATGAACTGG 
CAAGCGTTCG AATCGCTCGG CGAATCGTAC GGCGCGATGG TGAAACTACG CTACCGGAGC 
CGTCCGTGTG CGTGTATCAT AGAGCCGGAA GACGACCAGC GCGTATCGCT CGCGCTGCGG 
AGTCCGCAGC CAACCACGGC GCCGGGCCAA TACGCCGTTC TCTACGACGG CGACACCGTA 
TTGGGAGGCG GCATGATTGA GGAGGTAATG CACGCATGA
 
Protein sequence
MNASGRIALG MSGGVDSAVS AALLMRAGYE VVGVTCRFRD NAATERAAAD AAAVCSQLGI 
RHEAPGCVGE FERCVVEPFV SSYAAGLTPS PCVGCNARCK MPALVRVAGE LGCDRIATGH 
YARIARLSDS GRFVVKRALD ARKDQSYMLS LLSQEQLARL VLPLGAMTKA EVRVIAADLG 
LVVAEKAESQ DNCFIEGDYR PFLRARGVED APGDIVDRMG NVLGCHEGLA NYTVGQRKGI 
GVAGPEPYYV VEKRVETREL VVGFADETLI GSVVVGGMNW QAFESLGESY GAMVKLRYRS 
RPCACIIEPE DDQRVSLALR SPQPTTAPGQ YAVLYDGDTV LGGGMIEEVM HA