| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2316 |
|---|
| Symbol | |
|---|
| ID | 8416640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 2723445 |
|---|
| End bp | 2724107 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645025300 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003182663 |
|---|
| Protein GI | 257792057 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.166278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAACC ACAAGACGCC TGCAGGCGAA ACGGCGGGAA GCGAGCGGCG CGATGCGCGC
GGCCGGCTCA TGTCGTGCGC CGTCGCGGAG TTCATGGAGA AGGGGTTCGC CGGAGCTTCG
CTGCGCTCGA TAGCCGCGGC TGCCGATATG ACCACGGGCG CCATCTACGG GTACTTCTCC
GGCAAGGAGG CCCTGTTCGA CGCCGTCGTG GCCCCGGCCG CCGACGAGCT GTACGCCCGC
TACGAGGGCG CCCAGGACCG GTTCTACGAG CAGCCTCTCG AGGCCCAGAC GTTCGAGCGG
ATGAGGGTCT ACGAAGAGCG CATGATGCAC GATCTGCTCG ACTTCGTCTA CGACAACCGC
GACGCGTTCG TCCTCGTGTT CGCGAGATCG GCCGGCACCG CGTGGGAGCG CTACCTCGAC
CGCTTCATCG AGCTTGAAGT GCGGAGCACC GCCCGCTACG TGCGCGAGAT GCGCGAGCAC
GGTATCGGGG TCGTCGAGCC CACGCCCGAG ATGTCGCGCA TCCTGGCCGG CATGTTCTTC
CGCGGCTACT TCGAGCCGCT GCTGCTGGGC CTGTCGCGCG AGGCGGCCCA CGCGTTCGTC
GCCGATTTCG AGCGCTTCTT CCACGCCGGC TACGAGACGA TCATGAGCCC CCAGCCGTCG
TGA
|
|---|
| Protein sequence | MRNHKTPAGE TAGSERRDAR GRLMSCAVAE FMEKGFAGAS LRSIAAAADM TTGAIYGYFS
GKEALFDAVV APAADELYAR YEGAQDRFYE QPLEAQTFER MRVYEERMMH DLLDFVYDNR
DAFVLVFARS AGTAWERYLD RFIELEVRST ARYVREMREH GIGVVEPTPE MSRILAGMFF
RGYFEPLLLG LSREAAHAFV ADFERFFHAG YETIMSPQPS
|
|---|
| |