| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2315 |
|---|
| Symbol | |
|---|
| ID | 8416639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 2721337 |
|---|
| End bp | 2723163 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645025299 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003182662 |
|---|
| Protein GI | 257792056 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.29878 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.596997 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCGG GAAACGCGGT TGTTGCGGAC GATGCCTGCG TCGGCGCGCC CGAGCGGGGC
CCGGCGTCCG CGGAGAAGCG GGAGCCGAAC CCGGTGGCGC TGCTGCTGGC GTGGTCGGAG
GAGAACAGGG GCCGCTACGC GCTGTCGGTG CTGCTGGCCG TGATCGGCGT GGCGGGCAGC
ATCGTGCCGT ACGTGGCGGC GGGGCAGATG ATCGTGGGCG TGCTGGGCGG GGTGCGCGAC
TTCGGCTTCT ACCTCATGTG GTGCGGCGTG GCGGCGGCGG GCTACGCCGG CTACATCGTG
TGCCACCACG CCTCGACCGC CGTGTCGCAC AAGGCCACCT TCTCCACCAT CAGCAAGGTG
CGCCGGCGCA TCGCCGACAA GCTCACGCGC GTGCCACTGG GCTACGTGCT GGACACGCCT
TCGGGCAAGC TCAAGAACAT CATGGTGGAG AAGGTGGACA GCATCGAGAC GACGCTGGCG
CACGTGGTGC CCGAGATGAC GTCGAACCTG CTGGTGCCCG TTGCCGTGGT GGCGTTCATG
TTCGCGCTCG ACTGGCGCAT GGCGCTCGTG GCGCTCGTCA CGCTGCCCAT CGGGTTCGTG
GCCTACATGG GCATGATGAA GGACTACGAC CGGTGGTACG CGAAAACGGT GCAGGCCGGC
GAGGACATGA GCACCACGGC GGTCGAGTAC GTGAACGGCA TCGAGGTGAT CAAGGCGTTC
GGCCGGTCGG CCAGCTCCTA CGAGAAGTTC TCGGAGACGG TGGGCCGCTA CGCGCGCTCG
TTCATCGACT GGATGCACCA CGTGCAGATC TTCCAGGACC TGGGCCTGGC CATCTGGCCG
GCCACGCTGG TGACGGTGCT GCCGGTGGGA TGCCTGTTCA TCCTGCAGGG CACGCTCGAG
CCGGCCACGC TCGTGATGGT CGCCGTGCTG TCGCTGTCCA TCTTCCCGCC GCTGTACGCG
GCCATGAGCT TCATCGACTC GCTCGCGCAG ATCGGCACGG TGGTGGAGCA GATCACCGCC
ATCCTCGACG AGCCGGAGCA GCGCCGCGCC TCGGCGTCGG TCGGCGCCGA GGCCCTGGCG
CAGCCGCGCG GCACGCGCAT CGAGCTCGAG GGCGTGCGCT TCTCCTACGG GCGCGAGGAG
GTCGTCCACG GCGTGGACCT GGCCATCGAG CCGGGGCAGG TGACGGCGCT CGTCGGGCCG
TCCGGGTCGG GCAAGTCGAC GCTCGCGCGC CTGATCGCCG GGTTCTGGGA CGCGGACGCC
GGCACGGTGC GCCTTGGCGG CGTGCCGGTG GGCGAGCTCT CGGCCGAGCA GCTTGCGGGC
TGCATCTCGT ACGTCGAGCA GGACAACTAC CTGTTCGACG ACACGGTGAT GGAGAACATC
CGCATGGGCA GGCCGGGCGC TTCCGACGAG GAGGTGGTGG CCGTGGCGAA GGCGAGCGGC
TGCCACGAGT TCATCGAGGC GCTCGAGCAC GGCTACCGGA CGGTGGTGGG CGGCGCGGGC
GGCCACCTCT CGGGCGGCGA GCGCCAGCGC ATCGCCATCG CGCGCGCCAT GCTCAAGGAC
GCGCCCGTGG TCATGCTCGA CGAGGCCACG GCGTACACCG ACCCCGAGAA CGAGGCGATC
ATCGAGCAGG CCGTGGGCAA GCTGGTGGCG GGCAAGACGC TCGTCGTCAT CGCGCACCGC
CTGTCCACCA TCGTCGATGC CGACAAGATC GTCGTCGTGC GCGACGGGCG CATCGAGGCC
CAGGGCACGC ACGACGAGCT CATGGCCGGT TGCCCGCTGT ACGCGGGCAT GTACCGCGCC
CACATCGACG CCAAAGACGC GGCATAG
|
|---|
| Protein sequence | MDAGNAVVAD DACVGAPERG PASAEKREPN PVALLLAWSE ENRGRYALSV LLAVIGVAGS
IVPYVAAGQM IVGVLGGVRD FGFYLMWCGV AAAGYAGYIV CHHASTAVSH KATFSTISKV
RRRIADKLTR VPLGYVLDTP SGKLKNIMVE KVDSIETTLA HVVPEMTSNL LVPVAVVAFM
FALDWRMALV ALVTLPIGFV AYMGMMKDYD RWYAKTVQAG EDMSTTAVEY VNGIEVIKAF
GRSASSYEKF SETVGRYARS FIDWMHHVQI FQDLGLAIWP ATLVTVLPVG CLFILQGTLE
PATLVMVAVL SLSIFPPLYA AMSFIDSLAQ IGTVVEQITA ILDEPEQRRA SASVGAEALA
QPRGTRIELE GVRFSYGREE VVHGVDLAIE PGQVTALVGP SGSGKSTLAR LIAGFWDADA
GTVRLGGVPV GELSAEQLAG CISYVEQDNY LFDDTVMENI RMGRPGASDE EVVAVAKASG
CHEFIEALEH GYRTVVGGAG GHLSGGERQR IAIARAMLKD APVVMLDEAT AYTDPENEAI
IEQAVGKLVA GKTLVVIAHR LSTIVDADKI VVVRDGRIEA QGTHDELMAG CPLYAGMYRA
HIDAKDAA
|
|---|
| |