| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2222 |
|---|
| Symbol | |
|---|
| ID | 8416544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 2609372 |
|---|
| End bp | 2611003 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645025207 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003182572 |
|---|
| Protein GI | 257791966 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0859777 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCATG AGAGGTTCGA CAACGAAGAC GAGCTGCGCC GGGCGGTGAT CCGGAATTTG
GACGCGAGCC CGATTCCCCC GCAGGTGCAG GTCAAGCTCG ACGGCGTGTA CGCGTCGCTG
GGCTCCATTC CTCAGGATCG CCCCACGCCG TCGGGCGCGG GCGCTCCGCA GCGTCGGCAG
CCGGTCAAGC GGCGGTCTGC CGAGCCTGCG CACGGCAAGC GCAAGGGCGC CAGCGTGGCG
CGCCGCGGTG CGATGGTGGC GGTTGCGGCC GTGCTCGTCG TGCTGTTGAG CGGTGTCGCC
TTCGCCGCAT CGCGCCTGGT GCAGATGCAG CCGGGCGATG TCGGATTTTT CGGGGGCGGT
AACAACCTGC CCATATACAA CAGCTTGCAG CCCGGGGTTT CCAGCCTGAA CGCCGAGGTG
GGCGATACCG TTGAAGTCGA CGGCGTGCAG GTGACGCTCG ATTCGGTGTC GTGCGATCGC
AACATCGTCA ACCTGTTCTT CACGTTGGAG AAGGAGGGCG GCTTCGACCT GACCGAGCAG
TCGAACTACG AGGGCTCCCA GGAAAACGAA TGGGCGCGCT TGCAGCGGCT TGCTCCGCGC
TTCTCGTACA GTCTTTCGAG CAACGGCGAG GCGATCGGCA AAGATTCCGT CTACGTGCTC
GATGCGTACC AAAAAGACGG CAAGGTGAAG ATCATGGAGC GCATCGTGCC GGAAGCGACG
CTTCCCGACC AGGTGGACAT CGCGCTGGAA GGCTATGCGA TGTGGAAGCA GTTCGAAGAA
GGAGACGAGC CCTTCACGTT CGATGTCGGC CTCGACCTGA GCACGGTGGC CAGTCCGCGC
GAGCTGGGCG CGCACGACCT CGTGTTCAAC ACGAGCGACG GCGACAAGAC GATGGGCATC
CAGCGTTTCA CGGCATCCGA GCTGGGCACC GTGATGGTCG TGCGCAACGA CAACGAGTGG
ACGGGAGAGC AAGGCGAATA CGGTTCTTCC TACGGCCCGC CCGAGAACGT GCTGAGTCCT
CATTTGCTTA AGGTAACCGA TGACCAGGGC AACGTTTTGA CTCCGGTCGA AGCTGGCGAT
GGTTCGGGCG TCAATCCGGA GGGTTCGCAG ATTATCGAGT TCTCCAATCT CTCGCCCGAA
GCGCATAGCG TCACGTTCAC GCCGATGTTG AACGCGCTCG ACTGGGACTC GATGACGGTC
GAGGAGCGTA AAGCGAGGAA TGAGGAAAAC GTACAACATG TGGACGTCTC TCGAATCGGC
ACCACATTGG AGACGAGCGA GTTCGGCGGC TACGAGCTGA CCGGCTGGGA CGTGACCGAT
GGAACGGTGA GCATATCGCT CAAGCCCTAC GGATGGCAGG CTATGGGACC GTACATGGAG
CTCATTTCCG AAGACGATGT GACGCTCTTG GAGAGCACAT GGACGGATCC CGAGACGGGC
GAGACGGGAA CCGGCTACCA TTCGGGCATC ATGTATCGCA AGCACGACTA TATGACCGGC
GAGTTCGTCC AGATGGTGTC GTACTACGCC GCAGACGATG ATGAGCTGCG CGGGCTCACG
AACTACAGTT ACCGCTCTGC GTTCGGTGAG TATCGGGAAG AGCCAGACGC GGCGCAGACG
CTCTCGTTCT AA
|
|---|
| Protein sequence | MSHERFDNED ELRRAVIRNL DASPIPPQVQ VKLDGVYASL GSIPQDRPTP SGAGAPQRRQ
PVKRRSAEPA HGKRKGASVA RRGAMVAVAA VLVVLLSGVA FAASRLVQMQ PGDVGFFGGG
NNLPIYNSLQ PGVSSLNAEV GDTVEVDGVQ VTLDSVSCDR NIVNLFFTLE KEGGFDLTEQ
SNYEGSQENE WARLQRLAPR FSYSLSSNGE AIGKDSVYVL DAYQKDGKVK IMERIVPEAT
LPDQVDIALE GYAMWKQFEE GDEPFTFDVG LDLSTVASPR ELGAHDLVFN TSDGDKTMGI
QRFTASELGT VMVVRNDNEW TGEQGEYGSS YGPPENVLSP HLLKVTDDQG NVLTPVEAGD
GSGVNPEGSQ IIEFSNLSPE AHSVTFTPML NALDWDSMTV EERKARNEEN VQHVDVSRIG
TTLETSEFGG YELTGWDVTD GTVSISLKPY GWQAMGPYME LISEDDVTLL ESTWTDPETG
ETGTGYHSGI MYRKHDYMTG EFVQMVSYYA ADDDELRGLT NYSYRSAFGE YREEPDAAQT
LSF
|
|---|
| |