Gene Elen_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2188 
Symbol 
ID8416510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2568151 
End bp2569029 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content67% 
IMG OID645025174 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003182539 
Protein GI257791933 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.907948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAC TCGTAGCATT GGAAACCCAA GCCCCGAAAG CGGGCTATGC CATGGATGAC 
ACGCGCGCGA ACGTCGATCC CAAGCCGCAG TTGGAAAGCG ACCTCTACCG GGCAGCAGGC
AAGCTGGACG GCAAGGCGGC CCTCGTCACC GGCGGCGACA GCGGCATCGG CGCGGCCGTG
GCCATCGCGT TCGCCAAAGA GGGCGCCGAC GTGGCGATCG CCTACTACTC GTCCGACGAC
GACGCGCAGG CGGTGGCCGA GCGCATCCGC GAACTGGGAC GGCGCGCGCT CGTGTTCAAG
GGCGACGTAG GCGACGAGGC GTTCTGCCGC GATATGGTCG AGGGGATCGC GGCCGAATGG
GGTCGCCTCG ACGTGCTCGT GAACAACGCC GGAGAGCAGA CACCGGCCGA GAGCATCCTC
GACTTGACCC AAGAGCAGCT GGTCCGCACG TTCCAGACCA ACATCTTCAG CATGTTCTAC
CTGGTGAAAG CCGCACTCCC CCACCTGCCC GAGGGAGGCG CCATCGTGAA CACCACGTCG
GTGACCGCCT ATCAGGGCTC GCCGAACCTG CTGGACTACT CGGCCACGAA GGGGGCCATC
ACCGCGTTCA CCCGCTCGCT CTCCGAGAAC GAAGACCTCG TGAGCCGCCG CATCCGCGTG
AACGGCGTGG CGCCCGGGCC TATCTGGACG CCGCTGAACC CCGCCTCGTA CGGGCTCGAC
AGCGACAAGG TGAAGCACTT CGGCGAGTCG ACGCCCATGG GGCGCCCCGG CCAGCCCTAC
GAGCTGGCGC CCGCCTACGT CTTTCTGGCC AGCGACGATT CCAGCTACGT CTCCGGCCAG
GTGATCCACG TGAACGGCGG CACCGTGGTG AACGGGTAG
 
Protein sequence
MSELVALETQ APKAGYAMDD TRANVDPKPQ LESDLYRAAG KLDGKAALVT GGDSGIGAAV 
AIAFAKEGAD VAIAYYSSDD DAQAVAERIR ELGRRALVFK GDVGDEAFCR DMVEGIAAEW
GRLDVLVNNA GEQTPAESIL DLTQEQLVRT FQTNIFSMFY LVKAALPHLP EGGAIVNTTS
VTAYQGSPNL LDYSATKGAI TAFTRSLSEN EDLVSRRIRV NGVAPGPIWT PLNPASYGLD
SDKVKHFGES TPMGRPGQPY ELAPAYVFLA SDDSSYVSGQ VIHVNGGTVV NG