Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_2105 |
Symbol | |
ID | 8416423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 2476074 |
End bp | 2476967 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645025088 |
Product | tyrosine recombinase XerD |
Protein accession | YP_003182457 |
Protein GI | 257791851 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.179497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00877552 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACGAGC TGTATCGAGA GTACCTGGCG TATCTGCGCG TCGAGCGAGG CAGCTCTCCG TTGACCGTGT CCGCGTACGC CGCCGACCTC AAGGACTACG CGCAGTTTCT CGAGAAACGC GGGGTCGAGT CGCTGGACGA CGTCGATCGC GAGGTCATCG TAGCTTACGA GTCGGATCTG TTCGGCCGCG GGTATGCGGC CTCGACGGTG GACCGCCATG TGTCCGTGCT CAAGGGGTTC CACCGCTTCC TCGTGCGAGA AGGCTACGCG CGCCGCAATC CGGCCGACAC TATCCAGCTT CCCAAGGCGC CCGACCGTCT TCCCGACGTG CTTTCGGTGG CGCAGGTGGA CGCCATGCTG TCGCGCCCGC TGGACGAAGG CCCTCTGGCC CTTCGCAACC GGGCCATCCT CGAGGTCCTG TACGGTTGCG GGCTGCGCGT GAGCGAGTGC ACGGGGCTCG ATTTGGGCGA CGCCATCTTG GAGGAAGGTT ATCTTCATAT CCTGGGCAAG GGGAATAAGG AACGCATCGC CCCCATCTCG GGCGCCGCGC TGCGCGCGCT GCGCGACTAC CTCGAGCGCG GACGCCCCGA GCTCGTCCGC TCGTACGCGA AATCCACCTC GGCCGTGTTC CTCAACGCGC GCGGCGGGCG GCTGACGCGC CAGAGCGTGC ACTCCCTCGT CGCCGAGGCC GGCCGCTTCA TCGGCGTGGC GAACCTTCAT CCGCACACGC TGCGCCATTC CTTCGCCACC CACATGCTCG CCGGCGGCGC CGATCTGCGC GTCATCCAAG AGATCCTGGG GCATTCGGAC ATCTCCACCA CCCAGATCTA CACCCATGTG AACCGCACCC ATATCCGCGA GGAGTATCTG AGCGCCCATC CCCGCGCGAA GTAG
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Protein sequence | MDELYREYLA YLRVERGSSP LTVSAYAADL KDYAQFLEKR GVESLDDVDR EVIVAYESDL FGRGYAASTV DRHVSVLKGF HRFLVREGYA RRNPADTIQL PKAPDRLPDV LSVAQVDAML SRPLDEGPLA LRNRAILEVL YGCGLRVSEC TGLDLGDAIL EEGYLHILGK GNKERIAPIS GAALRALRDY LERGRPELVR SYAKSTSAVF LNARGGRLTR QSVHSLVAEA GRFIGVANLH PHTLRHSFAT HMLAGGADLR VIQEILGHSD ISTTQIYTHV NRTHIREEYL SAHPRAK
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