Gene Elen_2099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2099 
Symbol 
ID8416417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2468815 
End bp2470299 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content71% 
IMG OID645025082 
ProductUDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diamin opimelate/D-alanyl-D-alanylligase 
Protein accessionYP_003182451 
Protein GI257791845 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0770] UDP-N-acetylmuramyl pentapeptide synthase 
TIGRFAM ID[TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00126482 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTTTGA ACCACAAGCA GATCGCCGCA TGCACGGGAG GCTCGTTCAT GGTGGAGCCG 
CTTGATCCGC GCGCGCTGGC CACGGGGCTC ACCTGGGACT CGCGCGACGC GAAGCCGGGC
GACGTGTACG TCGCGCTGCC GGGCGAGCGC GTGGACGGCC ACGACTTCGT CGGTGCGGCC
CTCTCGGGCG GTGCCGTGTG TGCGCTTGTG ATGCAGCCGC TGGACGAGGC CGTGCGCATG
TTGGCCGCCG AGCTGGGCGC AAGCGTTATC GAGGTGCCCG ACACGGCCCA CGCCGTGGCG
GACATCGCGC GCGAATGGCG CTCTCACCTG CACGGTCGCG TGATCGCGCT GACGGGTTCC
ACCGGCAAGA CCACCACGAA GAACCTTGTG CGCGACGTGC TGGCAAGCAC GCTGTCCACG
GTGGCGACGG CCGGCAACCA GAACAACGAG CTGGGCGTTC CCAAGACGCT GCTCGCCGCC
GAGCAGGACA CGCAGGCGGT GGTGGTGGAG ATGGGCATGC GCGGCGCGGG CCAGCTGGCC
GACCTATGCG ACTACGTGCG CCCCGATTGG GGCCTCGTGG TGAACGTGGG CGAGAGCCAT
ATCGAGCTTC TGGGCAGCCG CGAGAACATC GCGCGCGCCA AGGCCGAGCT TCTGTGCGCG
CTGCCGGAGG GCACGGGCCG GGCGTTCGTG AACGCCGACG ACGACTACGC CGATTTCGTG
CGCGAGCATG CGCGCCTCGA CGCGCGCCGC GTGGAGACCG TGCTGTTCGA CGGCTCCGCC
GCCGCAGCCG AGCGCCGCGC CCAGGCCGAT GCCGCCGAAG CGGCGCGTCC CGCCGTGTGG
GCCGAGCAGG TGGAGCTCGA CGAGCAGGGT CGCCCGCGCT TTCGGCTGCA CGCCGTCGGC
TTCGCGGACG CCCCTGAGGA GGAGACGGCG CGCTGCGCGC TCACGCTGCG CGGCCTGCAC
AACGTGTCGA ACGCATGCGC CGCGACCGCG GTCGGCCGCG CCTGCGGCAT CCCGCTGGCC
GTCTGCGCCG ATGCCCTCGC GCATGCCGAG CCGGAAGCCG GCCGCCAGGA AGTGCTCCGT
GCGCGCGGCG GGTTCACCGT GGTGAACGAC GCCTACAACG CCAACCCCGA CTCCATGCGC
GCCTCGCTTG CGACGTTCTG CGCGCTGGAC GTGCCGGGCA AGCACGTGGC CGTGCTCGGC
GACATGGGCG AGCTGGGAAG CTACGCCCCG GCCTGCCATG CGGGCATCGG GGAGTTCGCC
GCCACGCTGC CGCTCGACCG GCTCGTGTGC GTGGGCGAGC TGTCCCTGCA CATAGCCGAC
GCCGCTGAGC GCGCCGGCAT GGATCCCCAG CGCATCGTGC GCGCGGGCTC TCTTTCTGAA
GTGTTCGGAG ATTTGGACGC CTGCGTCGAG CCCGGAGACG CCGTGCTGGT GAAGGCGTCT
CATTTCATGG GTCTGACTCG CGTAGTCGAA GGACTGGTCA ATTAG
 
Protein sequence
MRLNHKQIAA CTGGSFMVEP LDPRALATGL TWDSRDAKPG DVYVALPGER VDGHDFVGAA 
LSGGAVCALV MQPLDEAVRM LAAELGASVI EVPDTAHAVA DIAREWRSHL HGRVIALTGS
TGKTTTKNLV RDVLASTLST VATAGNQNNE LGVPKTLLAA EQDTQAVVVE MGMRGAGQLA
DLCDYVRPDW GLVVNVGESH IELLGSRENI ARAKAELLCA LPEGTGRAFV NADDDYADFV
REHARLDARR VETVLFDGSA AAAERRAQAD AAEAARPAVW AEQVELDEQG RPRFRLHAVG
FADAPEEETA RCALTLRGLH NVSNACAATA VGRACGIPLA VCADALAHAE PEAGRQEVLR
ARGGFTVVND AYNANPDSMR ASLATFCALD VPGKHVAVLG DMGELGSYAP ACHAGIGEFA
ATLPLDRLVC VGELSLHIAD AAERAGMDPQ RIVRAGSLSE VFGDLDACVE PGDAVLVKAS
HFMGLTRVVE GLVN