Gene Elen_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2088 
Symbol 
ID8416406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2455493 
End bp2456278 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID645025071 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003182440 
Protein GI257791834 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000857475 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000100219 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAGA CGAATCAGCG CGCGACCGAC GCGCAGCATA AAGGCGGCCT CTCCAGGCGC 
CAGTTCATCG CCGGGATCGG CGGATTGGGA ATCGGCGCCG TGCTGGGAAG CGGCATCACG
GCGCTGCTGT TGCCCGACGA CGTGTACGCC ATCGAGGCGA GCCAAGGCTA CCTGCTGGTG
GATGCGAAGA AGTGCGCCGG CTGCGAGACG TGCGTCATCT CGTGCTCGCT CGCGCATCTG
GGCCGTATCA ACACCTCGCT TTCGCGCATC CAGGTGATGA AGAACGCGCT GGGAAGCTTC
CCCTCCGACG ACGTCATGCA GAACCAGTGC CGCCAATGCC CCTACCCTTC CTGCGTGGAA
GCCTGCCCCG TGGGCGCCAT GCACGCCGAC CCCGAGACGG GCGTGCGCCT CGTGGACGAG
GGCAAGTGCA TCGGCTGCGA GCGCTGCGTG GAGGCGTGCC CCTTCACGCC GTCGCGCGTG
CAGTGGAACT TCGAGGACAA GCACGCCCAG AAGTGCGACC TGTGCAAGAA CACGCCCTTC
TGGGATGAAG AGGGCGGCCC GTCCGGCAAG CAGCTGTGCG TCGAGATCTG CCCCATGAAG
GCCATCGCGT TCACCAACGT GCTGCCCGTC CAAACCGACG AAGGCTACAC GGCGAACCTG
CGCAACGACC ACTATCTGGA AATCGGCCTG CCCAGCGACG ACGAGGCGCG CATCCCTCCC
GCGCGGCTCG GATACGGCGC AGGCGGCACG GCAGCCCAGG CGGCAGCCGG CTCGAACGAC
AAATAA
 
Protein sequence
MTETNQRATD AQHKGGLSRR QFIAGIGGLG IGAVLGSGIT ALLLPDDVYA IEASQGYLLV 
DAKKCAGCET CVISCSLAHL GRINTSLSRI QVMKNALGSF PSDDVMQNQC RQCPYPSCVE
ACPVGAMHAD PETGVRLVDE GKCIGCERCV EACPFTPSRV QWNFEDKHAQ KCDLCKNTPF
WDEEGGPSGK QLCVEICPMK AIAFTNVLPV QTDEGYTANL RNDHYLEIGL PSDDEARIPP
ARLGYGAGGT AAQAAAGSND K