Gene Elen_2072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2072 
Symbol 
ID8416389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2439938 
End bp2440645 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content73% 
IMG OID645025054 
Productsiroheme synthase 
Protein accessionYP_003182424 
Protein GI257791818 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 
TIGRFAM ID[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.628826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000044464 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTCGAGA CGGTTCGCGA GCGAATTCCC GACGGCGCGG AAGAGGGAGC ATCGTACTAT 
CCGGTGTTCC TCGACGTGCG GGGAAGGACG GCGCTCGTGG TGGGCGGCGG GGCCGTCGCC
GAGCGGAAGG CCGCAGGCCT TGCCCGGGCG GGCGCGTGCG TTCGAGTCGT GGCGCCGACG
GTCACGGCGG GCTTGGAGGC GCAGGCGCGC GACGGCCTCG TCGATCTGAG GCGCCGCGCA
TTTCGCGAAA ACGACGTCGA GGGCGTGTTT CTCGTGTACG CTGCCACCGA CGACGCGGCG
GTGAACGAGG CGGTGTACGC CGAAGCCGAG GCGCGCGGCG TGCCGGCGAA CGTCGTGGAC
GATCCTGCGC ATTGCAGCTT CATCGTGCCG TCGGTGGTGC GGCGCGGGCC GTTGCAGTTG
GCCGTGTCCA CGTCGGGCGC CGCGCCTGTG CTTGCGAAGC GGCTGCGGCG GGAGCTGGAA
GGGCGCTTTC CCGAGGATTG GGCGGTCTAC GTGGACCTGC TGGCCGAGGT GCGCGCCCTC
GTGCGTTCGC GCATGGCCGG CGGCGAAGCC GAGCGCGCCC CGGTGCTCGA GGCCGCTTGC
GACCTGGGAG TGCTCGAGCG CCTGCGCGCA GGCGAGCGGC TCGATGCCGA GGCCGTGTAC
GCGGAAGCGC TTCGAGCGGC CCGCGCCGGG GCGGGTGACG GGCGATGA
 
Protein sequence
MVETVRERIP DGAEEGASYY PVFLDVRGRT ALVVGGGAVA ERKAAGLARA GACVRVVAPT 
VTAGLEAQAR DGLVDLRRRA FRENDVEGVF LVYAATDDAA VNEAVYAEAE ARGVPANVVD
DPAHCSFIVP SVVRRGPLQL AVSTSGAAPV LAKRLRRELE GRFPEDWAVY VDLLAEVRAL
VRSRMAGGEA ERAPVLEAAC DLGVLERLRA GERLDAEAVY AEALRAARAG AGDGR