| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2050 |
|---|
| Symbol | |
|---|
| ID | 8416361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 2401442 |
|---|
| End bp | 2403532 |
|---|
| Gene Length | 2091 bp |
|---|
| Protein Length | 696 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645025027 |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_003182403 |
|---|
| Protein GI | 257791797 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.426387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAG ATGAAGCTCC TTCATACGAT ATTCTTCCAA CCGACTTGAA TGCTGCTGGC
ACTGATTCCG AACTGGTGTT TGACGATGAT TCGGAAAACG GCGGAAAGGG AGTTGGCGAT
GCTAGCCCGG GTCAACTCTC TGGCGACTCT GCAGGAACTT CGGACGGATC CGCTAATCTT
GAGAAGGCGG TGGACGTTAC CGTGCCCGGC GAGGTCGACA AAGCGGCTCG GGGTGAGACC
CATGCGCCAG AAATAGAGTT AGAGGAGCTG GAGGAAGAGC TTTCTGCGAC CTCCGAGCAG
ATCGTTGCCG ACGGCTGGAC GGTCGGCGCC GACGGATCGG TCCTCTACTA CGAGGGCGGG
TCGGCCCTCA CGGGCTGGCT CGTGGACGAC GGCTACCGCT CCTACGGCCT GCAGCGCTAC
TGGTTCGACT CGGCCGGCCG CCTCGTCGTC GGATCGCTGG CCGACGTCGG GGGCGGCGAG
TGGGCCTACG CCCGCCCCGA GGGCTTCGTG GTGCGCGGCA AGTACGTCGC CGCCGACGGC
AGCGTGTACC TGGCCGACAA CGACGGGCGC CTGGAGCGCG CCGGCTGGGT CGTGACCGAC
TCCTACGACG GCGGCATGCA GCGCTACTGG GTGGACGCCT CCACCCACGC GGCCGCCACC
GGGTTCTTCG AGGCGGAGGG CTCGTCCTAC TACGGGCTCC CCGGCGACGG CCGGGAGCTG
CGCGGCGCGG CGGCGGTGGG CGGCGAGCTC GTGGTGGCCG ACAACGACGG CCGGCTCCTC
GAGCGGGGCT GGGCCGTGAC CGACGCGTTC GGCCAGGGCC TGCAGCGCTA CTGGTTCGAG
GGCTTCCGCG CGGCCCGCTC CCTGCTGGCC GACGTCGGGG GCGGTGAGTG GGCCTACGCC
CGCCCCGAGG GCTTCGTGGT GCGCGGCAAG TACGTCGCCG CCGACGGCAG CGTGTACCTG
GCCGACAACG ACGGGCGCCT GGAGCGCGCG GGCTGGGTCG TGACCGACTC CTACGACGGC
GGCATGCAGC GCTACTGGGT CAACGCCTCC ACCCATGCGG CGGCCACGGG CTTCTTCGAG
GTCGACGGGG CGTCCTACTA CGGAAACGCT GCTACTGGTT TCGTCGTCAG AGGGCGGAAT
GTTTGCGATG GGGGCGTTCT CCTCTCGGAT AACGATGGCA GATTGGCATC GGGCGAAGGG
TGGCTTGTTT CTCGGGCTTA CTCGGATGGT CTTGAACGCT ACTGGCTTTA TAAAATGTCG
AACGGTTACG TTGCCGCTCG GGTCGGTTTC TTCACGGCAT CCGACGGGAA AGCGTATTAT
GCGTACCCCT CCTCGGGCAC GGTAGCTCGG GGAAAGACCT CGTATGGCTC CGGCGTACTC
TTGTCGGATA ACGAAGGTGT ATTGGTGGAG AATATCGCCG GTGAAGGGTG GCTCGTTACG
GGGCTATACG ACGACGGCAT GCTTCAGCGT TACCGTATCG ACAAGTCGTG CGGCGGCCAC
TTAGGCGCGC ATGTGGGTAT GTTTTCTCTC GAGGGCGATT TCTATTATGG GCTTCCGTCA
GTGGGGTACG TGTTGCGAAA CGCAACGAGC ATGGTGGACG GTAGATGGTG CAACGCTGAT
AACGACGGTA CATTGACTTT CATCGCGAAC AGAGCATTCC GGCTTTCGGA TGGTACGTAT
CAGTGGACAG ACAGCTCTGG TAGGGTGAAC CAGAACGAGG CTATGTCGCG ACTGATGAGC
GCCGCTCATT CCGTCTTGGG CGTCCCTTAT GTTTGGTTGG GCAACTACCC CGAAGACGGG
GGCATGGATT GCGCGTCTTT CACGTATTGG TGCTACAAGC AGATAGGCAT CACCATAGAT
TTCGAGACAT ACGGGCAAAT CCACGAAGGC CGTGCTGTTT CCCTGTCCGA AGCTCGACCT
GGTGACCTTA TCCTGATGTA TTTCTCATCT CCTGGGGTTC CCGAGCATGT TGTCATGTAT
GCAGGCAACG GTATGGTGTA CGAAGAGCCT ACGTTTGGCG GGCATTGTCA GTATGTACCG
CTCTCTTCGA AAAACGCTTG GGATATTGTA GTTCGGAGGA TACTAGCCTG A
|
|---|
| Protein sequence | MEKDEAPSYD ILPTDLNAAG TDSELVFDDD SENGGKGVGD ASPGQLSGDS AGTSDGSANL
EKAVDVTVPG EVDKAARGET HAPEIELEEL EEELSATSEQ IVADGWTVGA DGSVLYYEGG
SALTGWLVDD GYRSYGLQRY WFDSAGRLVV GSLADVGGGE WAYARPEGFV VRGKYVAADG
SVYLADNDGR LERAGWVVTD SYDGGMQRYW VDASTHAAAT GFFEAEGSSY YGLPGDGREL
RGAAAVGGEL VVADNDGRLL ERGWAVTDAF GQGLQRYWFE GFRAARSLLA DVGGGEWAYA
RPEGFVVRGK YVAADGSVYL ADNDGRLERA GWVVTDSYDG GMQRYWVNAS THAAATGFFE
VDGASYYGNA ATGFVVRGRN VCDGGVLLSD NDGRLASGEG WLVSRAYSDG LERYWLYKMS
NGYVAARVGF FTASDGKAYY AYPSSGTVAR GKTSYGSGVL LSDNEGVLVE NIAGEGWLVT
GLYDDGMLQR YRIDKSCGGH LGAHVGMFSL EGDFYYGLPS VGYVLRNATS MVDGRWCNAD
NDGTLTFIAN RAFRLSDGTY QWTDSSGRVN QNEAMSRLMS AAHSVLGVPY VWLGNYPEDG
GMDCASFTYW CYKQIGITID FETYGQIHEG RAVSLSEARP GDLILMYFSS PGVPEHVVMY
AGNGMVYEEP TFGGHCQYVP LSSKNAWDIV VRRILA
|
|---|
| |