| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2043 |
|---|
| Symbol | |
|---|
| ID | 8416354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 2393796 |
|---|
| End bp | 2394368 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645025020 |
|---|
| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
|---|
| Protein accession | YP_003182396 |
|---|
| Protein GI | 257791790 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAG GAGACAGCGT CAAGCACGGC AACTTCACGT TCACCGAGAC CTCCATCGAG
GGGGTTCTCG TCGTGGACGT CACGGCCTAC GGCGACGAGC GCGGCTACTT CGCCGAGACC
TACAAGCGCC CCGATTTCGT CGCGGGCGGC ATCGATGCAG AGTTCGTGCA GGATAACCAG
TCCTCCTCGA CCAAAGGCGT GCTGCGTGGG TTGCACTTCC AGATACACCA CCCCCAGTCC
AAGCTCGTGC GCGTGGTGTC CGGAGAGGTG TTCGACGTGG CCGTCGACCT GCGCCCGGGC
AGTGCCACGT ACGGCGCATG GGAGGGCGTG GTGCTGTCGG CGGAGAACCG CCGCCAGTTC
TTCGTGCCGC GCGGGTTCGC CCACGGCTTC CTCGTGCTGT CCGACATCGC CGAGTTCTGC
TACAAGTGCG ACGACGTGTA CCATCCCAAC GACGAGGGCG GCCTCATGTG GAACGACCCC
GAGATCGGCA TCGAATGGCC CATACCCGAG GGCATGGAGC TCGTGCTGAG CGAGAAGGAC
AAGGCGCACC CGGGGTTGAG CGGGCTCTCG TAG
|
|---|
| Protein sequence | MAAGDSVKHG NFTFTETSIE GVLVVDVTAY GDERGYFAET YKRPDFVAGG IDAEFVQDNQ
SSSTKGVLRG LHFQIHHPQS KLVRVVSGEV FDVAVDLRPG SATYGAWEGV VLSAENRRQF
FVPRGFAHGF LVLSDIAEFC YKCDDVYHPN DEGGLMWNDP EIGIEWPIPE GMELVLSEKD
KAHPGLSGLS
|
|---|
| |