Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_2000 |
Symbol | |
ID | 8416311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 2344264 |
End bp | 2347068 |
Gene Length | 2805 bp |
Protein Length | 934 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645024977 |
Product | preprotein translocase, SecA subunit |
Protein accession | YP_003182353 |
Protein GI | 257791747 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000011814 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGGAT TTCTTTCCAA GCTCCTGACG CTTGGCGAGG GCAAGCAGCT CAAGCACTAC GAAGCCACCG CGGCCAAGAT CAACGGCCTC GAATCCGAGA TGCAGGCGCG CTCTGACCAG GAGCTTCGCG CGCTCACCGC CGCGTTCCGC GAACGCGCCC AGAACGGAGA GGATCTCAAG AGCCTTCTGC CCGAAGCGTT CGCCGCCGTG CGCGAGGCCT CGGTGCGCAC GCTGGGGCTG CGTCACTTCG ACGTGCAGCT CATCGGCGGC ATGGCTTTGA ACGACGGCCA GATCGCCGAG ATGAAGACCG GCGAGGGCAA GACGCTCGTC TCCACGCTGG CCGGCTACCT GAACGCCCTG CCCGGCAACA ACGTGCACGT GGTCACCGTC AACGACTACC TGGCCCGTCG CGACAGCGAG TGGATGGGGC AGGTGTACCG CTTCCTCGGC ATGGAGGTGG GCCTCATCCA GAACGGCATG CGCCCCGACA AGAAGATACC CGCCTACAAG GCGGATGTCA CTTACGGCAC GAACAGCGAG TTCGGCTTCG ACTACCTGCG CGACAACATG GTGACGCGCG CAGAGGCCCG CGTGCAGCGC GGCCACCACT TCGCCATCGT CGACGAGGTG GACTCCATCC TCATCGACGA AGCCCGCACG CCGCTCATCA TCTCGGGAGC GGGCACGCAG GCGGCCGAGA CGTACAATAA GTTCGCGCGC GTCATGGTCG GCCTCGTGCC CGAGGCCGAC TTCGACATGG ACGAGGCGAA GAAGACCATC AACGCCACCG AGAGCGGCCT GGAGAAGATC GAGGCCATGC TCGGCATCGA CGACATCTAC GCCGACCCGT CCGGCCAGCT GCCGAACCAC TTGCAGCAGG CGCTCAAGGC CCAGTTCCTG TTCCACCGCG ACGTGGACTA CGTCGTGGTG AACGGCGAGG TGAAGATCGT CGACGAGTTC ACCGGCCGCA TCATGGAAGG CCGCCGCTAC TCCGAGGGCC TGCACCAGGC GCTCGAGGCG AAAGAGCGCG TGCTCGTGCG CGAGGAGAAC CAGACGCTGG CCACCATCAC GCTGCAGAAC TACTTCCGCC TGTACGAGAA GCTCTCCGGC ATGACCGGCA CGGCCATGAC CGAGGACGCC GAGTTCCGCG AGATCTACAA GCTGCCGGTC GTGGCCATCC CGCCGAACCG CCCAGTCGCC CGAAAGGACG AGGACGACCT CATCTACCGC ACGGTGGAGG CGAAGTTCAA CGCCGTGGCC GACGACGTGG CCGAGCGCAA CAAGGCGGGC CAGCCCTGCC TCATCGGCAC CGTGTCCATC GAGAGCTCCG AGAAGTTGTC GCGCCTGCTG GACAAGCGCG GCATCAAGCA CGAGACCTTG AACGCGAAGA ACCACGAGCG CGAGGCACAC ATCATCGCGC AGGCGGGCCG CGTGGGCGCC GTGACCATCG CCACGAACAT GGCCGGCCGA GGCACCGACA TCCTGTTGGG CGGCAACCCC GACGTGCTGG CCGACGACGT GCTGCGCGAG CGCGGGCTCG ATCCGGACGC CGAACCTTTG ACCGAGGACG GCGAGCCGAA CCCGGCCCTT CCCACCGACG AGCAGCGCGC GGACGCGCTG GCCGAGGCGA AGCGCGTGTG CGCCGAGGAG CACGACCAGG TCATCGCGGC CGGCGGCCTC ACCGTCATCG GCACCGAGCG CCACGAGTCG CGCCGTATCG ACAATCAGCT GCGCGGCCGT GCCGGCCGTC AGGGCGACCC CGGCGTGACG CAGTTCTACC TGTCGCTCGA AGACGACCTC ATGCGCCTGT TCGGCGGCAA CCGCATGGAC TCCATCGCCC GCATGATGGA GAAGACCGAC ATGCCCGAGG ACATGCCCAT CCAGGCCGGC ATGGTGTCGA AGGCCATCGA AGGCGCCCAG CGCCAGGTGG AGAGCATGCA CTTCGCCGCC CGTAAGAACG TCCTCGAGTA CGACGACGTC ATGAACCTGC AGCGCGTGGC CATCTACAGT GAGCGCAACG CCATCCTCGA CGGCAAAGAC ATGGACGAGC GCATCCCCGA GATCATCGGC GACGCGGTGG AAGCCGTCGT CGCGGAGAAC TGCCCGGCCA AGGTGCCCAG CGACGACTGG GATGCCAAGG CCGTGGAGCT GTGGGCCGCC AACATGACGG GTCGCGACGA CTTCAGCGTG GCCGAGGTCG ACCACGACGA CGACCCCGCC GTGCTGTCCG AAGCGTTGGA AGCGTACTTG GAGGACGTGT TCGCGAGCAA GTCCGAGCAG CTGGGCGAGC CGGTGATGAA GATGCTGGAG GGCCAGGTCA TGCTGCGCAT GATCGACACG CGCTGGATGG CGCACCTCCA GGAGATGGAT TATCTCAAGG CCGGTATCGG CCTGCGCGCG TTCGGCCAGC GCGACCCGCT GGTGGAGTAC AAGAACGAGG CGTACAACGC GTTCCAGAAC CTGACTGCGG GCATGTACGA GGATTATCTG CGCACGCTGT TGCGGCTCCA GGTGGCTGTG AAGCAGGAGC AGCCGGCGTT GGCGGAGGAC AAGAGCCCGC TCGACGGAAA GGTGAGCTAC TCGTCTCCCG AGCAGGCTCT CGAGCAGACG GGCGTGGGCG CCGCGCGCAA GCAGGCGGCC GCGTCGCCGA GCGGCGCCCC GGCGGCTCCG CCCAAGCCCG CGGCGGCGAA GCCCCAGACG TACACGAAGG ACAAGGACGA TCCCTTCGCC AACGTCGGGC GCAACGAGCC GTGCCCCTGC GGCTCGGGCC TCAAGTACAA GAAGTGTCAC GGACGAGATC AATAA
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Protein sequence | MAGFLSKLLT LGEGKQLKHY EATAAKINGL ESEMQARSDQ ELRALTAAFR ERAQNGEDLK SLLPEAFAAV REASVRTLGL RHFDVQLIGG MALNDGQIAE MKTGEGKTLV STLAGYLNAL PGNNVHVVTV NDYLARRDSE WMGQVYRFLG MEVGLIQNGM RPDKKIPAYK ADVTYGTNSE FGFDYLRDNM VTRAEARVQR GHHFAIVDEV DSILIDEART PLIISGAGTQ AAETYNKFAR VMVGLVPEAD FDMDEAKKTI NATESGLEKI EAMLGIDDIY ADPSGQLPNH LQQALKAQFL FHRDVDYVVV NGEVKIVDEF TGRIMEGRRY SEGLHQALEA KERVLVREEN QTLATITLQN YFRLYEKLSG MTGTAMTEDA EFREIYKLPV VAIPPNRPVA RKDEDDLIYR TVEAKFNAVA DDVAERNKAG QPCLIGTVSI ESSEKLSRLL DKRGIKHETL NAKNHEREAH IIAQAGRVGA VTIATNMAGR GTDILLGGNP DVLADDVLRE RGLDPDAEPL TEDGEPNPAL PTDEQRADAL AEAKRVCAEE HDQVIAAGGL TVIGTERHES RRIDNQLRGR AGRQGDPGVT QFYLSLEDDL MRLFGGNRMD SIARMMEKTD MPEDMPIQAG MVSKAIEGAQ RQVESMHFAA RKNVLEYDDV MNLQRVAIYS ERNAILDGKD MDERIPEIIG DAVEAVVAEN CPAKVPSDDW DAKAVELWAA NMTGRDDFSV AEVDHDDDPA VLSEALEAYL EDVFASKSEQ LGEPVMKMLE GQVMLRMIDT RWMAHLQEMD YLKAGIGLRA FGQRDPLVEY KNEAYNAFQN LTAGMYEDYL RTLLRLQVAV KQEQPALAED KSPLDGKVSY SSPEQALEQT GVGAARKQAA ASPSGAPAAP PKPAAAKPQT YTKDKDDPFA NVGRNEPCPC GSGLKYKKCH GRDQ
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