Gene Elen_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1999 
Symbol 
ID8416310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2343163 
End bp2344257 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content66% 
IMG OID645024976 
Productpeptide chain release factor 2 
Protein accessionYP_003182352 
Protein GI257791746 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.285694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000104835 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGATA GAGACGAAAA AGACTTGGAG AAGGTAGCCC AGCGCGTCGA GGCGGCGCAC 
GGCTACCTGC ACATCGACGA GCGCGCGGCG GAGCTGGCGA AGCTCGACGA GGAGATCGCG
CAGCCCGGCT TCTGGGACGA CGCCTCGCAT GCCCAGAGCG TGTCGAAGCA GGCCAGCGTG
CTGCGCGACA CCATCGCAGA GTACGACGAG GCCGCAGCGT TGTTGGACGA TGCGCGCGCC
GCGTTCGACT TGGCATCGGA GGACGAGCTG TTCGCCGAGG AGGCCTCCGC GGCTCTCGAC
AAGCTCGACG AGCTGCTGGA CGCGCTCGAG ATCAGCTCGT GGTTCTCGGA GCGCTTCGAC
GGCGGCGACG CCATCCTGAC GGTGAACCCC GGCTCCGGCG GCCTCGAGGC CCAGGACTGG
ACCGACATGC TCTACCGCAT GTACGTGCGC TACGCCGAGA AGAAGGACTG GAAGGTCACC
GTGCTCGACG TGGTCCCGGG CGAGGGCATC GGGCTGGACA AGGCCACCAT CCAGATCGAA
GGACGCAACG CCTTCGGCAT GCTGAAAAGC GAGAGCGGCG TGCACCGCCT CGTGCGCATC
AGCCCCACCG ACGACAAGAA GCGCCGTCAC ACCACGTTCG CGGGCGTGGA GGTGCTGCCG
GTGCTGCCCG ACGACATCGA GGTGGATCTC AACCCCGCCG ACGTGCGCGT GGACGTGTAC
CGCTCCAGCG GCCCCGGCGG CCAGTGCGTC AACACCACCG ACTCGGCCGT GCGCCTTACG
CACATCCCCA CGAACATCGT GGTGACGTGC CAGAACGAGA AGTCCCAGCT GCAGAACAAG
GAAGCGGCGT TCCGCGTGCT CAAGGCGAAG CTCTACGAGC GCGAGGAGCA GAAGCGCCAA
GAGGAGCTGG CCGAGCTGCG CGGCGACCGC ATGGACAACA CCTTCGGCAG CCAGATCCGC
AACTACGTGC TGTACCCCTA CCAGATGGTG AAGGACGTGC GCAGCGGCAT CGAGACCGGC
AACGTCGACG CCGTGCTGGA TGGGGAGTTG GATGAGTTCG TAATAGGCTA CCACCGTTGG
CGAGTATCTC AATGA
 
Protein sequence
MADRDEKDLE KVAQRVEAAH GYLHIDERAA ELAKLDEEIA QPGFWDDASH AQSVSKQASV 
LRDTIAEYDE AAALLDDARA AFDLASEDEL FAEEASAALD KLDELLDALE ISSWFSERFD
GGDAILTVNP GSGGLEAQDW TDMLYRMYVR YAEKKDWKVT VLDVVPGEGI GLDKATIQIE
GRNAFGMLKS ESGVHRLVRI SPTDDKKRRH TTFAGVEVLP VLPDDIEVDL NPADVRVDVY
RSSGPGGQCV NTTDSAVRLT HIPTNIVVTC QNEKSQLQNK EAAFRVLKAK LYEREEQKRQ
EELAELRGDR MDNTFGSQIR NYVLYPYQMV KDVRSGIETG NVDAVLDGEL DEFVIGYHRW
RVSQ