Gene Elen_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1987 
Symbol 
ID8416298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2331214 
End bp2331978 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content70% 
IMG OID645024964 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_003182340 
Protein GI257791734 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.638298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACG AAACCGAAAC TCCGCGTCGA AGCGCGGTCG TCACCGGCTC GAACCGCGGC 
ATCGGCCGCG CGGTGGCCGA GGAGCTGGCG CGCGCGGGCT TCGACGTGTG CGTGAACTGC
TCGAGCGAGC GCGGGCTGGA CGAGGCGCGG GCGTTCGCCG CAGCCCTGGA GGCCGACTGC
GGCGTGCGCG CCATCGCGGT GGCCGCCAAC GTGGCGGACG CCGCCGAGGC CGCTGCGCTC
GTCGACGCCG CCCAGGAAGC GTTCGGCCGC GTGGACGTGC TGGTGAACAA CGCCGGCATC
ACGCGCGACG GGCTGCTGGC GCGCATGAAG GACGAGGACT TCGACGCGGT GATCGACGTG
AACCTCAAGG GCACGTTCAA CTGCTGCAAG GCCGCGGCGC AGCGCATGAT GAAGCAGCGC
TACGGACGCA TCGTCAACAT GTCGAGCGTC GTGGGCGTGG CGGGCAACGC GGGCCAGGCG
AACTATGCGG CCTCGAAGGC CGGCGTCATC GGGCTCACGA AGTCCATCGC CCGCGAGCTG
GCGGCCCGCA ACGTCACGGC CAACGCCGTG GCCCCGGGCT TCATCGCCAC CGACATGACT
GACGCGCTGT CCGAGAAGCA GCGCGAGGCC ATCGTGGGGC GCATCGCGTC CAAGCGCCTC
GGGGAGCCCG AGGACGTGGC GAAGCTCGTG CGCTTCTTGG CCAGCGAGGA CGCGGGCTAC
ATCACCGGAC AGGTTGTCTG CATCGACGGA GGTATGTCGC TATGA
 
Protein sequence
MTNETETPRR SAVVTGSNRG IGRAVAEELA RAGFDVCVNC SSERGLDEAR AFAAALEADC 
GVRAIAVAAN VADAAEAAAL VDAAQEAFGR VDVLVNNAGI TRDGLLARMK DEDFDAVIDV
NLKGTFNCCK AAAQRMMKQR YGRIVNMSSV VGVAGNAGQA NYAASKAGVI GLTKSIAREL
AARNVTANAV APGFIATDMT DALSEKQREA IVGRIASKRL GEPEDVAKLV RFLASEDAGY
ITGQVVCIDG GMSL