Gene Elen_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1979 
Symbol 
ID8416290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2318079 
End bp2320277 
Gene Length2199 bp 
Protein Length732 aa 
Translation table11 
GC content59% 
IMG OID645024956 
Productmetal dependent phosphohydrolase 
Protein accessionYP_003182332 
Protein GI257791726 
COG category[R] General function prediction only 
COG ID[COG1203] Predicted helicases 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR01587] CRISPR-associated helicase Cas3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000184282 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTAT CCCATGTTGC CGAAGACGGG CGCATCGAAG AAGTGGCCGA CCACCTGCGG 
GAGGTGGCCG AGATGGCGGC CGAGTTCGCG CGGCCGTTCG GGGCCGAATC GTGGGCCTAT
GCCGCAGGAA TGGCGCACGA CATCGGCAAG TATTCCACGG AATTCCAGAA CCGCATCCTA
TGCGACGGGC ATAAAGTCGA TCACTCCACG GCGGGGGCTG CTCTGCTTGA TCAGTTGGGT
TTGAAATTGC TCGCTTACTG CGTTGCCGGC CATCATGCAG GGCTTCCCGA CGGGGGCACT
ACGGCAGATG TCGAAGACTG TCCGACTCTG CGCGGTCGAC TGCTGCGGGC ACAACACGGT
AGCATCCCCG ATTGCGCCGC CTATGCGCGC GAAGTCGAGC TTAACGTTCC GAAAGGCCCT
TCCGTTCTGC CTGTTTCTCG CGATCGGGAG GACGGAGCCT ATTCGCTTTC GTTTTTGACG
CGCATGGTAT TCTCCTGTTT GGTGGATGCG GACTTCCTTT GCACCGAGAG ATTCATGCAG
GGCGAAGGAC GCGATCCTCT TTCGGAGCAA TCCCTTGTCG ATCTCCTGGG TTGCTTGAAA
GAAGAGGTAG CTCGCTTCTA CCCGCCGACG AGCGCGCTCA ACGAAACGCG CTGCCAGGTG
CTGGATGCAT GCATCAGAGC TGCTTCGAAC CACCCCGGTT TCTTCTCGCT AACGGTTCCC
ACCGGAGGTG GAAAAACGTA CGCGTCGCTG CTATTCGCGC TCGAGCATGC GGTTAAGCGC
GATGCACGTC GCGTAGTATA CGCCGTGCCC TATACGTCGA TCATCGAGCA GAACGCCCGC
GTCTTTCGCG ATGTGCTGGG AGAGCGCAGC GTTTTGGAGC ATCACGCGAA CTTCGATTTC
GATTTCGACG AAGAGGTGGA GTCGTACAAG TCAGGCGACG CGAAGAAGGC GCTTCGCCGA
GCGTCCGAGA ATTGGGACGC GCCCATCGTG GTGACGACGA ACGTACAGTT CTTCGAGTCG
CTCTACGCTA ATCGGACATC GCGCTGCCGC AAGCTGCACA ATATCGCGAA CAGCGTGATC
GTGCTTGACG AGGCGCAGAT GGTTCCCACC AAGCAGCTGC TTCCTTGTCT GCGCGCGCTT
ATAGAGCTCG TGGCGAACTA CGGTTGTTCG GTGGTACTGT GCACGGCGAC GCAGCCGGCC
TTCAACGGGA TGCTTGGACG AAAGGGGTTC GCCGTGCGCG AGATCGCACC TGCGCCGTCG
GAATTGTTCA AAAAGCTTAA ACGCGTCTCG TATCGTTTCG ACGGCGTGCT CGGTGATGAC
GATCTTGCAG CACGTTTGGC AGATCGCGAC CAGTCGCTTT GCATCGTGAA CAGCCGCAAG
CAGGCGAGGC GGCTGCATGA GCTGCTCGAC GGGGAAGACT CGTACCATCT GACAACCCTC
ATGCACCCTG TACATCGTGA GCGCGTGCTG AACGAGATCC GGCAACGTCT GCGCGAGGGC
CGGACTTGCC GGGTTGTGGC GACGAGCCTG ATAGAAGCGG GCGTCGACGT TGATTTCCCT
GTGGTCTACC GCGCGCTCGC TGGTGTGGAC AGCATGGTGC AAGCGGCTGG GCGATGCAAT
CGAGAAGGCC GGCAGTCGGC CGAGGAAAGC ATCGTGCACG TGTTCGAGCC CGCCGACGAC
TACGCTCTGC CTTCCGATGT CGCGCAGAAA GTGGCGATAG CACGAAGCGT CATAAGCGAG
ATGGAGGGAG CGGCATGCGA GTCGTGCGAT ATCGGGGCTC TCGAGGCGAT CGACGCATAC
TTTGCAAGGC TGTACGCCGT GCGCGAAGGA GCGCTCGACG CATCGGGAGT GCTGCGCGAT
CTCGAAGGGT TCAGCCTAAA ATCCCTCAAC ATACCCTTCA AGCGCGCGGC CGACGATTTC
CGCATGATCG AGGAAGGCTC GCGCACGGTG GTGATACCCG ATCCGGAAAT CGAATCCGAT
ATCCTCGCGG TGAAAACCGG TTTCGCGAAT CGCTCGACCA TACGCAGGCT CTCGCGCTAC
GCCGTCGGCG TTTACGATGG GGATATCAAG GCTTTACTGC GGAGCGGCAA GATAGAGACT
CTTGCCGAGG ACTTGTTCGT GCTGGTCGAT GGAACATGCT ACTCGGATCA ACGCGGATTG
GATCTGAAAA ACGAAGAAGG AAAGGGGATA TTCCTGTAA
 
Protein sequence
MHVSHVAEDG RIEEVADHLR EVAEMAAEFA RPFGAESWAY AAGMAHDIGK YSTEFQNRIL 
CDGHKVDHST AGAALLDQLG LKLLAYCVAG HHAGLPDGGT TADVEDCPTL RGRLLRAQHG
SIPDCAAYAR EVELNVPKGP SVLPVSRDRE DGAYSLSFLT RMVFSCLVDA DFLCTERFMQ
GEGRDPLSEQ SLVDLLGCLK EEVARFYPPT SALNETRCQV LDACIRAASN HPGFFSLTVP
TGGGKTYASL LFALEHAVKR DARRVVYAVP YTSIIEQNAR VFRDVLGERS VLEHHANFDF
DFDEEVESYK SGDAKKALRR ASENWDAPIV VTTNVQFFES LYANRTSRCR KLHNIANSVI
VLDEAQMVPT KQLLPCLRAL IELVANYGCS VVLCTATQPA FNGMLGRKGF AVREIAPAPS
ELFKKLKRVS YRFDGVLGDD DLAARLADRD QSLCIVNSRK QARRLHELLD GEDSYHLTTL
MHPVHRERVL NEIRQRLREG RTCRVVATSL IEAGVDVDFP VVYRALAGVD SMVQAAGRCN
REGRQSAEES IVHVFEPADD YALPSDVAQK VAIARSVISE MEGAACESCD IGALEAIDAY
FARLYAVREG ALDASGVLRD LEGFSLKSLN IPFKRAADDF RMIEEGSRTV VIPDPEIESD
ILAVKTGFAN RSTIRRLSRY AVGVYDGDIK ALLRSGKIET LAEDLFVLVD GTCYSDQRGL
DLKNEEGKGI FL