Gene Elen_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1943 
Symbol 
ID8416250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2277679 
End bp2279679 
Gene Length2001 bp 
Protein Length666 aa 
Translation table11 
GC content63% 
IMG OID645024916 
Productsodium/hydrogen exchanger 
Protein accessionYP_003182296 
Protein GI257791690 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR00831] Na+/H+ antiporter, bacterial form 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.575078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.181083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCCC TGCTCTTGCT GGCGGCCGTC CTCGTCTCGT CGGTCATCGA CCAGCTGGTG 
CCCAAGATCT CCTCGCCCCT CATACAGATC CTGCTTGGCC TCGGCATCGC GCTTCTCGCT
TCCTCGCAAA TCAAGATCGA ACTCGATGAC AAGCTGTTCC TCGTGCTGTT CATCGCTCCT
TTGCTCTACG ACGAGGCCAA GAACATCGAC AAGGCATCGC TGTGGCGCAA CCGCAAGCCC
GTGCTGTCGC TGGCCATCGG ACTGGTGCTT GCCACGGCGC TCGTCGTGGG GTTCGCCGTC
CACTGGCTCG TGCCGTCCAT CAGCTTGTTC GCCGCTTTCG CGCTGGGCGC GGCGCTCGGC
CCGACCGATG CCGTGGCGGT AGCGTCGCTT TCCAAGGAAA CGAGCATCTC CTCACGTTCC
AAGAGCATTC TCGAAGGCGA GTCGCTCATC AACGACGCCT CGGGCATCGT GGCGTTCCAA
TTCGCCATCG CAGCCGCCGT CACCGGCACG TTCTCCCTCG TCGACGCCAC AGCCGACTTC
CTGTTCAGCT TCTTCGGCGG TATCCTCATG GGCATCGCCC TGGGCTACCT GGGCAACTTC
CTAGTGCGCA AGGTTCGCTC GTGGGGCCTG GAGAACACGA CCTTCCACGT GTTGTTCGAG
GTGTTCACGC CGTTCATCGT GTACCTTGTG GCCAACGCGC TGCACACGAG CGGCATCCTG
GCCGTGGTGG CGGCAGGTCT CGTGAACGTC ATCTCGCCGC GCATCATCGG GCCGTCCATC
TCGCGCATGA ACATCGTCTC GACAAGCGTC TGGCGGGTGC TGTCCTTCGC GCTCAACGGC
GTGGTGTTCG TGTTGCTGGG CACGCAGCTG CCGCTCGCCT TTCAAGGAAC ATGGGAAAGC
ACGGCCGTTT CGAACGACAA GCTCATCGCG TACGTGCTGG GTCTCGCCTT CATCGTGATC
TTCGCACGAT TCGTTTGGGT GATGGCCATG GAATGGGTGC ACAGCCGCGC CGAACGCGCA
GATCGCCCGT TCGGGTTGGA GAACGTGCGC ACGGCTGCCG TCATGACCCT GGGCGGCCCG
AAAGGAGCCA TCACGCTGGC CGTGGCGTTC ACCATATCCT ACGCGGTGCC GCAGCGCGAC
CTCATGATAT TCATGGCCTG CGGCGTGATC GTAGTAACCC TGCTTCTGGC CACGTTCGTC
GTGCCCCTGC TGGCACCGAA GAAGCCGCCC ACCGACGAGG ACCTGCGCTG CGACGAGACC
GAGGTGAGCA TCGAGATACT GCGCACCGTC ATCGAGGACT TGGCCGCGCG CCAGACCGCC
GAGAACCGTG CGGCCACGCA GATGGTGATC CGCTCCTACA ACGACCGCAT CGCGCGCATC
AAAAGCCGCA ACGACATCGA GGACGAGCCG AACACGGCCC TGCGCCTGCA AGCGGTGCGC
TGGGAGCAGG AGCTCGCGCT CAAGCTCATC GACGACGAGG AGATCTACCC CATCATCGGC
TACCAGTACC TCAGCCGCCT CGCCCGCATC GAGAACATGC TGAAGCATCA TCGAGGCCGC
TGGTCGGCTC AGAACTTCAT GCTGCGCCTG CGAGCCATAG CGCGCTCGGG ATGGCACCGC
ATCGTCGCCG GACTGCCCGG CATCAACGTC ACGGAACGCG TGCAGGCCAT CCGCGATCTG
CAGATGCAAT GCGCCGAGCA CGTGGTGGAG CGCCTGCAGC AGAAGCTGGC CTCCCCCGAA
TCGGACGAAC CGGCCGAGGA CGTCAGCACG CTCTTGCTGG AATACCAGCG TTCCATCACG
GCCTTGCGCA ATGCCAACCC GTCCATCACC GCCCTCACGA ACACGGCAAG CAAGGCCCAA
GACATCGAAC GCTACGGCTT GCGCCTCGAG CTCGAGCAGA TCCAAGCGCG CTACGAAGAC
GGCGACCTGT GCCGATCCTC GTACAAGCGC CTGCGCGAGA ATGTCGCCCT GATGCAGGTC
GACCTGGAGG ACAACGTATA A
 
Protein sequence
MLALLLLAAV LVSSVIDQLV PKISSPLIQI LLGLGIALLA SSQIKIELDD KLFLVLFIAP 
LLYDEAKNID KASLWRNRKP VLSLAIGLVL ATALVVGFAV HWLVPSISLF AAFALGAALG
PTDAVAVASL SKETSISSRS KSILEGESLI NDASGIVAFQ FAIAAAVTGT FSLVDATADF
LFSFFGGILM GIALGYLGNF LVRKVRSWGL ENTTFHVLFE VFTPFIVYLV ANALHTSGIL
AVVAAGLVNV ISPRIIGPSI SRMNIVSTSV WRVLSFALNG VVFVLLGTQL PLAFQGTWES
TAVSNDKLIA YVLGLAFIVI FARFVWVMAM EWVHSRAERA DRPFGLENVR TAAVMTLGGP
KGAITLAVAF TISYAVPQRD LMIFMACGVI VVTLLLATFV VPLLAPKKPP TDEDLRCDET
EVSIEILRTV IEDLAARQTA ENRAATQMVI RSYNDRIARI KSRNDIEDEP NTALRLQAVR
WEQELALKLI DDEEIYPIIG YQYLSRLARI ENMLKHHRGR WSAQNFMLRL RAIARSGWHR
IVAGLPGINV TERVQAIRDL QMQCAEHVVE RLQQKLASPE SDEPAEDVST LLLEYQRSIT
ALRNANPSIT ALTNTASKAQ DIERYGLRLE LEQIQARYED GDLCRSSYKR LRENVALMQV
DLEDNV