Gene Elen_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1929 
Symbol 
ID8416233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2260414 
End bp2261919 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content63% 
IMG OID645024899 
Producttrigger factor 
Protein accessionYP_003182282 
Protein GI257791676 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 
TIGRFAM ID[TIGR00115] trigger factor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000213413 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0186919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAGG ATAGTTACGT GGAAACAAAA GTTGAGGCAT TGGAAGATAA CCGCACGAAA 
GTGACCGTTA CCGTCGATGC CGCGGACATC GATGCCCGCA TCAAGAAGAC CTACAAGGAC
TTCGCCAACA AGTACAACTT CCCCGGGTTC CGCAAGGGCA AGGCCCCGCG CCCGATCATC
GACAACGCCC TGGGCGCCGA AGCCGTGCGC GCGACGGTCA CCGACGACGT GGTCAACGGC
ACCTATCCTC TCGCCATCGA CGATTGCGAC CTGTACCCCA TCGCCAAGCC TGAATTCGAC
GAGACGGACC TCGTCGAGGC CGGCAAGCCC TACACCTTCT CGTTCACCGT CACGGTGAAG
CCCGAGATCG AGATCTCCAG CTACGAGCCC GTCGAGATCG AGCTGCCCGC CGAAGGCACG
ACCGACGCCG AGATCGACGA GCAGATCGAC GCCCTGCGCG AGCACTACTA CTCGTTCGAG
GACGCTTCCG CCGCCACGAA GGTGAAGGAA GACAGCTATA TCGACCTGGC CATGAAGGCC
ACCGACGACA AGGGCGAGGA GATTCCGTCG CTCACGACCG AGAACCGTCC CTACGGCTTG
GGCGCGAACC TGTTCCCGGC CGAGTTCGAC GAGCAGCTGG TGGGCCTGAA GAAGGGCCAG
ACCGCTACGT TCACGCTGGA CATGCCCGCC GATCCGCCCA TCATGCTGTC CGCGCTGGCC
GGCAAGACCG AGAAGATTAA CTTCGAGGTC GAGGTCAAGG TCGTCAAGAA GAAGATCGTT
CCCGAGGTCA ACGACGAGTG GGCCAAGGAG CAGATGGGCT TCGAAAGCGT CGAGGACCTG
CGTGCGCGCA TCGCCGAGTC CGTCACCAGC CAGAAGGCCG ACATGATGCC GCGCCTGAAG
GAGAACGCCT GCCTGTACGC GCTCGCCGAG CGCGTGGAGG GCGACGTCCC CGAGGCCATG
CTGGAGGACG CGGAGGCCAG CTTGATCCAG GACTTCTTCC AGCAGCTGCA GAGCCAGGGC
ATGACCTTCG ACGTGTACCT CGCCCAGCAA GGCATCACGC CCGACCAGTT CAAGGAGGAC
GTGAAGAAGC AGGCCGAGGA CATGTCCAAG CAGGATCTCG CGCTTGACGC GTGGGCCCGC
CACTTCGGCA TGGAGGCTAC GGCCGAGGAG GTCACCGAGG AGTTCGTGAA GAGCGGCGTC
GAGGATCCCG CGGCTCTGGA GGCCGAGTGG CGCTCGAACG GCCAGCTGCA CATGGTGCGC
CAGGGCGTGA TCCGCACGAA GGCCGTGAAG GACATCATGG ACAAGGCCGT CGTGACCGAG
CTCGACCTCT CGAAGAAGAA GGACGAGGAA AAGAAGCCGG CCAAGAAGGC TGCGGCCAAG
AAGACGGCCA AGAAGGACGA GGCCGCAGGC GACGAGCCCG CGAAGAAGCC CGCCAAGAAG
GCCGCTCCGA AGAAGGCTGC GAAGAAGGAC GAGGACGTCG AGGCCAAGGC CGACGACGCA
GAATAG
 
Protein sequence
MMEDSYVETK VEALEDNRTK VTVTVDAADI DARIKKTYKD FANKYNFPGF RKGKAPRPII 
DNALGAEAVR ATVTDDVVNG TYPLAIDDCD LYPIAKPEFD ETDLVEAGKP YTFSFTVTVK
PEIEISSYEP VEIELPAEGT TDAEIDEQID ALREHYYSFE DASAATKVKE DSYIDLAMKA
TDDKGEEIPS LTTENRPYGL GANLFPAEFD EQLVGLKKGQ TATFTLDMPA DPPIMLSALA
GKTEKINFEV EVKVVKKKIV PEVNDEWAKE QMGFESVEDL RARIAESVTS QKADMMPRLK
ENACLYALAE RVEGDVPEAM LEDAEASLIQ DFFQQLQSQG MTFDVYLAQQ GITPDQFKED
VKKQAEDMSK QDLALDAWAR HFGMEATAEE VTEEFVKSGV EDPAALEAEW RSNGQLHMVR
QGVIRTKAVK DIMDKAVVTE LDLSKKKDEE KKPAKKAAAK KTAKKDEAAG DEPAKKPAKK
AAPKKAAKKD EDVEAKADDA E