Gene Elen_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1925 
Symbol 
ID8416229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2254512 
End bp2255411 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content61% 
IMG OID645024895 
Productdiguanylate cyclase 
Protein accessionYP_003182278 
Protein GI257791672 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.201271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0141794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCCCGT ACGCGAGCAT CCATCCTGAG GTTGCGAGCG CCGCGACCGA CCTGCTGAGA 
TTCGATTATT ACCGGTTGGT CGATCCGCGC GACCACCGGG TGTTCGCGTA CGACCGCGAT
GGGGATCGTC TGATCGAGGT CGACGGTCCC TGCTACCAGC TGTGGAACCA GGACGATCCG
TGTCTCAACT GCTCGTCGCG CGCTTGCCTG ACGATGCAGG ACGCCGTGTT CAAGATCGAG
TACCTCGACG GTCGCGTGCT TCACGTAACC AGCGTGCCGA TGGACATAGA GGGCGCCGAG
CTTGTGCTCG AGCTGATCAA GGATGTGACG GACAGCCTGC TGGTGGCCGA CATCGAGGTG
CGCGACAACA TCGAGATCAC CCAAATGATC ACGAAGTTCA ACGAACTCGC CGTGCGCGAC
GGGTTCACGA AGCTGTACAA CAAGACCTTC ATCAACAACG AGCTGGAATC TCTCGTTCAG
GCTGCACGTG GCGGATCGCC GGCGGGAGAG GCCGCCGTGG TTCTGCTCGA CATCGATGGA
TTCAAGCAGA TCAACGATAC GTACGGGCAT ATTGCCGGCG ACGACGCCTT GCAGTACTTC
GCGAGCAAGA TGCGCAGTTT CTCACGCTCT TTCGACGGGT GGGTCGGACG TTTCGGCGGC
GATGAGTTCG TGCTGTGCGC GCCGAAAGGA CTTTCGGAAG GCGATCTGGA GCGTCTGTTC
GCTGAGATCG ACGCGATCGA GCGCCATGCG TTCCAGGCTG AGGCGGGGTC GTTCTCGCTT
GCGGCAAGTT GCGGCGTGTG CTTCGTGCGG CCGGATGACA CCGTTCGCTC GCTGCTGGAT
CGCGCTGACG TTGCCATGTA CCGGGCGAAG GAAAGCGGCC GAAGGTGGGT TGAGCGCTAG
 
Protein sequence
MFPYASIHPE VASAATDLLR FDYYRLVDPR DHRVFAYDRD GDRLIEVDGP CYQLWNQDDP 
CLNCSSRACL TMQDAVFKIE YLDGRVLHVT SVPMDIEGAE LVLELIKDVT DSLLVADIEV
RDNIEITQMI TKFNELAVRD GFTKLYNKTF INNELESLVQ AARGGSPAGE AAVVLLDIDG
FKQINDTYGH IAGDDALQYF ASKMRSFSRS FDGWVGRFGG DEFVLCAPKG LSEGDLERLF
AEIDAIERHA FQAEAGSFSL AASCGVCFVR PDDTVRSLLD RADVAMYRAK ESGRRWVER