Gene Elen_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1917 
Symbol 
ID8416221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2249012 
End bp2250328 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content52% 
IMG OID645024887 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_003182270 
Protein GI257791664 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.247022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00141201 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCGTGT ACCAAGATTT GGTCGAGCGG AAGACGAAGC TATCCCTTAT CGGACTGGGA 
TATGTTGGCA TGCCGATAGC GGTTGAGTTC GCTAAGCATA TCGAAGTTGT CGGATTCGAT
GTCAACGAAG AGAAAATCCG CTTGTACCGA AAGGGGGTCG ATCCGACGAA AGAAGTAGGC
GACGAGGCGA TCAGCTCCAC AGGCGTCGAC TTCACGTCGA ATCCCGAACG TTTACGGGAA
GCGCGTTTTC ATATAGTTGC TGTTCCTACT CCGATCAATC AGGACAAGAC CCCCGATCTG
TCGCCGGTTG TTGGGGCGTC GACCATGCTT GGCCGTCACC TTGAATGGGG TTCGATCGTG
GTTTTCGAAT CTACCGTCTA TCCTGGGGTC ACGGAGGACG TATGCGTTCC TATCCTTGAG
AGGGAATCCG GATTGCGGTG CGGCGTTGAT TTCAAAGTGG GTTACAGTCC TGAGCGAATC
AACCCCGGGG ACAAAGTCCA TACCTTGACC ACTATCCGAA AAATCGTTTC GGGCATGGAT
GATGAGTCCC TTGAAGAAAT CAAACGCGTG TACGACATCG TGATAGAGGC AGGCACCTAT
CCGGTCTCCT CGATCAAAAC AGCTGAAGCA ATTAAGGTAG TGGAGAACTC CCAGCGCGAT
ATCAATATTG CCTTCATGAA CGAGCTTGCC ATGGTCTTCG ACCGCATGGG TATCGATACG
AGCGAAGTCG TGGAGGGCAT GAACACGAAG TGGAATGCGC TCGGCTTTAA ACCAGGACTG
GTTGGTGGGC ATTGCATCGG CGTTGATCCG TATTACTTTA CCTACGAGGC CGAGAAGCTC
GGTTACCACT CTCAGATCAT TCTTTCGGGC AGAAGAGTGA ACGATGCCAT GGGAGGGTTT
GTTGCCGAGA CGGCCATCAG GGAGATGGTG CGAGTTGGGC TTGCTCCCAA GTCCTCGAAC
GTGGTCGTCT TGGGCATTAC CTTCAAAGAG AACTGTCCCG ATGTTCGAAA TTCCAAGGTG
TACGACATTG TCATGAGGCT AAAGGAATAT GGAGTCGAGC CGTCGGTGGT GGATCCTTGG
GCTTCGGGAG ACGAGGTGAA GCAGGTTTAC GGCATGCAGC TACGCGAGTC GGGTGATATT
GCGAACGCAG ATTGCCTGAT TGTCGCGGTT GCCCATGATG AGTTCAAAGA GCTGGGCTTC
GAGCGTATTG ATGCTTTCTT CGGAGACAAG CCCGACGAAA GCAAGGTGCT TTTGGATGTT
AAAGGAATAT TGGACGCGAA GCGCTTCTCG TCTTATGGAA GCTTTTGGCG GCTATGA
 
Protein sequence
MSVYQDLVER KTKLSLIGLG YVGMPIAVEF AKHIEVVGFD VNEEKIRLYR KGVDPTKEVG 
DEAISSTGVD FTSNPERLRE ARFHIVAVPT PINQDKTPDL SPVVGASTML GRHLEWGSIV
VFESTVYPGV TEDVCVPILE RESGLRCGVD FKVGYSPERI NPGDKVHTLT TIRKIVSGMD
DESLEEIKRV YDIVIEAGTY PVSSIKTAEA IKVVENSQRD INIAFMNELA MVFDRMGIDT
SEVVEGMNTK WNALGFKPGL VGGHCIGVDP YYFTYEAEKL GYHSQIILSG RRVNDAMGGF
VAETAIREMV RVGLAPKSSN VVVLGITFKE NCPDVRNSKV YDIVMRLKEY GVEPSVVDPW
ASGDEVKQVY GMQLRESGDI ANADCLIVAV AHDEFKELGF ERIDAFFGDK PDESKVLLDV
KGILDAKRFS SYGSFWRL