| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1901 |
|---|
| Symbol | panF |
|---|
| ID | 8416205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 2232969 |
|---|
| End bp | 2234507 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645024871 |
|---|
| Product | sodium/panthothenate symporter |
|---|
| Protein accession | YP_003182254 |
|---|
| Protein GI | 257791648 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4145] Na+/panthothenate symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02119] sodium/pantothenate symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000000150828 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAACC TCGCCGCGCT CGTCCCCGTC GCGCTGTTCC TCGCGTTCGC CGTAGGGCTC
AGCGTGGTCG TGCGCCACCG CACGCAGAGC GCGTCGGACG ACGGCGGCTT CGTGAAGGAG
TACTTCATCG GCAACCGCGG CCTGGGCGGC TTCGTGCTGG CCATGACCAC CATCGCCACG
TACGGGTCGG TGAGCTCGTT CGTGGGCGGT CCGGGCCAGG CGTGGAGCAT CGGCTTCGGC
TGGGTGTACA TGGCCGTGGT GCAGGTGACG GCGCTCGTTC TGCTGTACGG CATCGTGGGC
AAGAAGATGG CGCTCATCGC GCGCAAGCTC GATGCGATCA CGGTGGCCGA CGTCATCCGG
GCTCGCTACG GATCGAACGC GCTCGCGAAC TTGTCGGCCG CCATCGTCGT CGTGTTCTTC
GGCGCCACCA TGATCGCGCA GTTCGTGGGC GGTGCGAAGC TGTTCGAGGC CGTGACCGGC
TACTCCTACG TGTTCGGCCT CGTGCTCTTC GGCGTTGCCG TGATCCTGTT CACCACCATC
GGCGGCTTCC GCGGCGTGGC GCTGACCGAT GCGCTCTGCG GCATCGCCAT GCTCGTGGGC
ATCGTGGTCC TGGCCGCGGG CATCCTGGAC GCCGGCGGCG GCTACGAGGC CATCATGGGC
TCGATCGCGC AGAATCACCC CGAGATGCTG GAGCCCACGT CCGGCGGCAA CATGCCGCCG
TCGCTGTACC TTACCCAGTG GCTACTCGTG GGCGTGTTCA CGTTCGTCCT GCCGCAGTCG
GTGGTGCGCA CGATGGGGTA CAAGGACGTG AAATCGCTCC ACCGCGCCAT GATCGTGGGC
ACCGTCATCA TCGGCGCCAT GATGATCGGC GTCACGGCGC TCGGCGTGTT GGCCGCCGGC
GTGCTCACCG AGGATCTGGC GGCCTACGGC GGCAGCGTGG ACAACATCAT CCCGCTGGCC
ATCTCGCGGA CGTTGCCGCC GGTGCTGGCG GGCATCGCCA TCATAGGGCC GGTGGCCGCC
TCCATCTCCA CCGTGTCCTC GCTGCTTATC TCGTCATCCT CGGCGCTGGT CAAGGACGTG
TGGATGCATT ACGCCGAAGC GCGCGGCCGC CGCATGGGGG AGCGTGCGCT GTCCGTGTCG
AGCCAGGCGG TTACGCTGGG GCTGGGCGCG GTGGTGTTCG TGCTGGCCGT CGTGCCGCCC
GACGTCATAT GGAAGATCAA CATGTTCGCC TTCGGCGGCC TTGAGACGGC GTTTTTCTGG
GTGATGGTGT GCGGCCTGTT CTGGAGGCGG GCGAACCGGA CGGGTGCGCT GTGGTCGATG
GCGGGCGGTA CGCTGGCGTA TTGCGCAACG ATGGCGCTCG GCTTCAAAGT GGCCGATCTG
CATCAGATCG TCATAGGCAT CGTCGTGGCT GGCGTGTGCA TGGTCGCAGG CTCGCTGGCC
GGCAAGCAGG CGCCGGCCAG CCGCATGGAG GTGTTCTTCC CTGATTGCGA CAGCGGCGCG
GAGGCTGCGA ACGGGTCCTC GGCCCGCCGC GCGGGCTAG
|
|---|
| Protein sequence | MGNLAALVPV ALFLAFAVGL SVVVRHRTQS ASDDGGFVKE YFIGNRGLGG FVLAMTTIAT
YGSVSSFVGG PGQAWSIGFG WVYMAVVQVT ALVLLYGIVG KKMALIARKL DAITVADVIR
ARYGSNALAN LSAAIVVVFF GATMIAQFVG GAKLFEAVTG YSYVFGLVLF GVAVILFTTI
GGFRGVALTD ALCGIAMLVG IVVLAAGILD AGGGYEAIMG SIAQNHPEML EPTSGGNMPP
SLYLTQWLLV GVFTFVLPQS VVRTMGYKDV KSLHRAMIVG TVIIGAMMIG VTALGVLAAG
VLTEDLAAYG GSVDNIIPLA ISRTLPPVLA GIAIIGPVAA SISTVSSLLI SSSSALVKDV
WMHYAEARGR RMGERALSVS SQAVTLGLGA VVFVLAVVPP DVIWKINMFA FGGLETAFFW
VMVCGLFWRR ANRTGALWSM AGGTLAYCAT MALGFKVADL HQIVIGIVVA GVCMVAGSLA
GKQAPASRME VFFPDCDSGA EAANGSSARR AG
|
|---|
| |