Gene Elen_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1891 
Symbol 
ID8416195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2221257 
End bp2222315 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content65% 
IMG OID645024861 
Productpeptide chain release factor 1 
Protein accessionYP_003182244 
Protein GI257791638 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.871693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000024235 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGAGA AGCTGACGAA GATCATCGAA GCCTACGAGG ATGTGCAGGC GAAGATGGGC 
GATCCGGCAG TCCTCGCAGA TCAGAAGGAA TACAACCGCC TGGCCAAAGA GTACGCCAAC
CAGGGTCCTC TGGCGAAGAA GGCGCGCGAG TACGTGCAGG CGGCCGACGA TCTGGCCGAA
GCCAGGGAGA TGCTGGCCGA TCCGGACATG AAGGAATTCG CGTTGGAGGA AATCGCCGGC
ATCGAGGCGA AGCTGCCGGC GCTCGAAGAG GATATCAAGT TCATGCTGAT CCCGGCCGAC
CCGGCCGACG ACAAGGACAT CATCGTAGAG ATCCGCGCAG CTGCCGGCGG CGACGAGGCG
GCCATCTTCG CGGGCGAGCT GTACAAGATG TACGAGCGGT TCGCGAGCGC GCAAGGCTGG
AAGACCGAGA CGATGGACAT GTCGGCCTCC GAAGCCGGCG GCTTCAAGGA GATCCAGTTC
AAGGTCAAAG GCGACCACGT GTACTCGGTC ATGAAGTTCG AGAGCGGCGT GCACCGCGTG
CAACGCGTTC CGAAGACCGA GAGCCAGGGC CGCATCCACA CCTCCACGGC CACCGTGGCC
GTGCTGCCCG AGGCCGACGA GGTGGAGGTC GAGATCAACG AGAACGATCT GCGCATCGAC
GTGTACCGCG CCGGCGGCCC GGGCGGCCAG TGCGTGAACA CCACCGACTC GGCCGTGCGC
ATCACGCACC TGCCTTCGGG CCTCGTGGTG CAGTCGCAGG ATCAGAAGTC GCAGCTGCAG
AACAAGATCG CGGCCATGGC CGTGCTGCGC GCCCGTCTGT ACGAGAAGAT GTTGGCCGAG
CAGCAGGCCG CCGAGGGCGC GAAGCGCCTC GCGCAGATCG GATCGGGCGA CCGCTCCGAG
AAGATCCGCA CGTACAACGG CCCGCAGGAC CGCGTGACCG ACCACCGCAT CGGCTTCAAC
GGCACGTACA ACGGCGTGCT TCTGGGCGAC GGCCTGGGAG ACGTGATCAC CGCTCTGCAG
GCCGCCGACC GCGCGCAGAA GCTGGAAGCC GCGGTCTAG
 
Protein sequence
MREKLTKIIE AYEDVQAKMG DPAVLADQKE YNRLAKEYAN QGPLAKKARE YVQAADDLAE 
AREMLADPDM KEFALEEIAG IEAKLPALEE DIKFMLIPAD PADDKDIIVE IRAAAGGDEA
AIFAGELYKM YERFASAQGW KTETMDMSAS EAGGFKEIQF KVKGDHVYSV MKFESGVHRV
QRVPKTESQG RIHTSTATVA VLPEADEVEV EINENDLRID VYRAGGPGGQ CVNTTDSAVR
ITHLPSGLVV QSQDQKSQLQ NKIAAMAVLR ARLYEKMLAE QQAAEGAKRL AQIGSGDRSE
KIRTYNGPQD RVTDHRIGFN GTYNGVLLGD GLGDVITALQ AADRAQKLEA AV