| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1873 |
|---|
| Symbol | |
|---|
| ID | 8416177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 2202799 |
|---|
| End bp | 2204379 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645024843 |
|---|
| Product | D-3-phosphoglycerate dehydrogenase |
|---|
| Protein accession | YP_003182226 |
|---|
| Protein GI | 257791620 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.00847931 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGA AGGTGCTGGT TACCGAGAGG CTGGCCGAGG CGGGTCTCGC AGTGCTCCGC
GACAAGGGTT GCGAGGTCGA CGTCAAGCTG AAGATGACGC CCGAGGAGCT GATCGAGACC
GTTCCCGGCT ACGATGCGCT CATCGTGCGC TCGGCCACGA AGGTCACGGC CGAGGTCGTC
GAAGCCGCCG ATCGCCTGCG CATCATCGGG CGCGCCGGCG TGGGCGTGGA CAACGTGGAC
GTCGAAGCGG CCACCGAGCA CGGCATCATC GTGTGCAACG CGCCCACGTC CAACATCGTG
TCCGCCGCCG AGCACGCCAT CGGCCTCATG CTTGCCTGCG CGCGCAAGGT TCCGCAGGCG
AACGCGTCCA TGCACGAGGG CGTCTGGGAG CGCGGGAAGT ACACCGGCGT GGAGCTGTAC
GAGAAGACGC TCGCCATCTT CGGCCTCGGC CGCATCGGCG GCCTCGTGGC CGAGCGGGCA
CGCGCCTTCG GCATGAAACT GATCGGCTAC GACCCGTACT GCAGCCCCGA GCGCGCCGAG
CAGCTGGGCG TGACGCTGTA CGACGACGTG GACGCCCTTG TGCCGTTGGC CGACTTCATC
ACCGTCCACC TTCCCAAGAC GAAGGAGACC ATCGGGATGT TCGGGCCCGA CCAGTACGCG
CGAATGAAGG ACGGCGTGAT CCTGGTGAAC GCCGCGCGCG GCGGCATCTT CGACGAGAAG
TCGCTCGCCG ACTTCCTGGC CGCCGGCAAG ATCGGCGCGG TCGGCATCGA CGTGCACGAA
AGCGAGCCCT GCACGGACAG CCCCCTGCGC GAGTTCGACA ACGCCATCCT CACGCCGCAT
ATCGCGGCGT CCACGCAGGA GGCGCAGCTG CGAGCCGGCG TGCAGACGGC CGAGTACGTG
GCGGCGGGTC TCGAGGGATC CATCGTGCCC ACGGCCTTGA ACATGGCGCC CGTGCCGCCC
GAGGTGATGG ACGCGGTGGG ACCGTACGTG CCCGCTTGCC AGATGATGGG CAGCATGCTC
GCGCAGATCG ACGGCGAGAT CCCCCAGTTC CTGAAGCTGA CGACGGCCGG TGCGCTGGCG
CACGCCGACG CGTCCATCCT CGTTGCCGGC ACGCTCAAGG GCATCCTGTC CTACCAGAGC
ACGGCCACGG TGACGCCGGT GAACGCCGAC GCGGTGGCGA AGCGCCACGG CATCAAGGTG
GAGACGCTTT CGTCGCCCGA CGCCGGGGGC TACGCTTCCA CCGTGTCGGT GGTGGCCGAC
GGCACCGAAG TGGCCTGCAC GCTGGCGGGC GAAGCGCAGG CTGCGCGCCT CGTGTCGCTG
TTCGGCTACC AGCTGGACAT CGCTCCGGCC GGTCAGTCGC TCGTGTTCGA GTACGTGGAC
GCGCCGGGGC GCGTGGGCAC CATCGGCACC ATCCTGGGGG AGGCGGGCAT CAACATCACC
ACGATGCAGA TCGCCACGTT GCCCGGCGAG CAATGCGCGC TCGTGTACAT GAACGTGGAG
GGCGACGTCG ACGACGACGT GCTGTCCAAG CTGCGCGCGG GGCTGGGCGA CCTCAAAAAC
CTCTGGTACG TGAAGCTGTA G
|
|---|
| Protein sequence | MTKKVLVTER LAEAGLAVLR DKGCEVDVKL KMTPEELIET VPGYDALIVR SATKVTAEVV
EAADRLRIIG RAGVGVDNVD VEAATEHGII VCNAPTSNIV SAAEHAIGLM LACARKVPQA
NASMHEGVWE RGKYTGVELY EKTLAIFGLG RIGGLVAERA RAFGMKLIGY DPYCSPERAE
QLGVTLYDDV DALVPLADFI TVHLPKTKET IGMFGPDQYA RMKDGVILVN AARGGIFDEK
SLADFLAAGK IGAVGIDVHE SEPCTDSPLR EFDNAILTPH IAASTQEAQL RAGVQTAEYV
AAGLEGSIVP TALNMAPVPP EVMDAVGPYV PACQMMGSML AQIDGEIPQF LKLTTAGALA
HADASILVAG TLKGILSYQS TATVTPVNAD AVAKRHGIKV ETLSSPDAGG YASTVSVVAD
GTEVACTLAG EAQAARLVSL FGYQLDIAPA GQSLVFEYVD APGRVGTIGT ILGEAGINIT
TMQIATLPGE QCALVYMNVE GDVDDDVLSK LRAGLGDLKN LWYVKL
|
|---|
| |