Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1818 |
Symbol | |
ID | 8416122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 2138423 |
End bp | 2140114 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645024789 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003182172 |
Protein GI | 257791566 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.122494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.361334 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACCG AAGCCATCAC CGCCCCCGTC CCGGGCGATC CAGACTACCC GCTGCACTCC GAGAAGACCA TCGGCCGCTA CTTCCGCGAT CAGGTGGCTG TAGATCCCGA TCACGAGTTC GTCGTGTATC CCGACCGCGC GTTGCGTTGG ACGTACAAGG AGTTCGACGA GCGCACCGAC AACCTGGCGC GCGGCTTGCT CGCCATCGGC ATGCGCCCAG GCGATCACCT CGGCGTGTGG GCGCGCAACA TCCCCGACTG GCTGACGTTC ATGTACGCCA CGGCCAAGAT CGGCGTGGTC ATGGTCACGG TGAACCCCGT GTACAAGAGC CACGAGCTTG ACTACGTGCT GAAGCAGTCG GACATGAAGG CGCTGTGCGT CATCGACGCC TATCGCGACG TGGACTATCT GAAGATCATC CGAGATCTCG TGCCCGAGAC GCTCACGCAG CAGCGCGGCT ACCTGGAGTC CGAGAACTAC CCCTTCCTCA AGAACATCAT CTACATGGGT CCCGAAAAGC ATCGCGGCTG CTATAGCGTG CCGGAGCTCG TGCTGCTGGG AAGCCATGTG CCCGAAGAGG CGTTGGCAGA GGCGGAAACC CATTTCGACA ACAACGACGT GGTGATGATG CAGTACACGT CCGGCACCAC GGGCTTTCCG AAGGGCGTCA TGCTCACGCA CCGCAACATC CTGAACAACG GCTTCTATAT CGGCGAAGGC CAGAAGCTCG GACCCGACGA CCGCGTGACG CTGCCCGTTC CGTTCTTCCA CTGCTTCGGT TGCGTGCTGG GCGTCATGGC GAACCTTACG CACCGCTCCA CCATGATCAT CGTGGAGGAG TTCGACGCGG GGCTCGTGCT GCAGGCCGTA CATAAGGAGC GCGCCACCAG CGTCTACGGC GTGCCCACCA TGTTCATCGC CGAACTCAAC CACCCCGACT TCGATACGTT CGATCTGTCC AGCCTGCGCA CAGGCATCAT GGCCGGCAGC CCCTGCCCGC CCGAGACCAT GCGCGAGGTC ATGGACCGCA TGTACATGAA GGAGATCACC ATCTGCTACG GCCTCACCGA GACGAGCCCC GTGTTCACGC AGACCAGCGC CGACGACGAC ATCGAGCACA AGTGCGAGAC GGTGGGGCGC AAGCATCCTC CGGTGGACGT GCGCGTGATC GACCCCGCCG ACGGCCGCAT CTGCGGACCT GGTGAGCCTG GCGAGCTGTG CTGCAAGGGC TACAACGTGA TGAAGGGCTA CTACAAGATG CCCGAGGAGA CGGCGCGTGC CATCGACGCG GACGGCTACC TGCATTCGGG CGACCTCGGC ACGGTGGACG AGGACGGCTA CTACCGCGTT ACCGGGCGCA TCAAGGACAT GATCATCCGC GGAGGCGAGA ACGTGTACCC CTTGGAGGTG GAGAACTTCC TCTTGACCAT GCCCGGCGTG CTGGACGCCC AGGTGGTGGG CATTCCTGAT CCGAAGCTGG GCGAGCTCGT GGGCGCGTTC GTCCGCGTGC GCCCCGGTTA CGAGGATATG ACCGAGGACG ATGTGCGCGC CTTCGCCATT CCGCGCATCG CTCGCTACAA GGTGCCCAAG CGCGTGTTCT TCGTGGACGA TTTCCCTATG ACCCCGTCCA TGAAGGTGCA GAAGTTCAAG CTGCGCGAAA TGGCCGAAGA GCTGGTGCGA GCAGGCAAGT AG
|
Protein sequence | MTTEAITAPV PGDPDYPLHS EKTIGRYFRD QVAVDPDHEF VVYPDRALRW TYKEFDERTD NLARGLLAIG MRPGDHLGVW ARNIPDWLTF MYATAKIGVV MVTVNPVYKS HELDYVLKQS DMKALCVIDA YRDVDYLKII RDLVPETLTQ QRGYLESENY PFLKNIIYMG PEKHRGCYSV PELVLLGSHV PEEALAEAET HFDNNDVVMM QYTSGTTGFP KGVMLTHRNI LNNGFYIGEG QKLGPDDRVT LPVPFFHCFG CVLGVMANLT HRSTMIIVEE FDAGLVLQAV HKERATSVYG VPTMFIAELN HPDFDTFDLS SLRTGIMAGS PCPPETMREV MDRMYMKEIT ICYGLTETSP VFTQTSADDD IEHKCETVGR KHPPVDVRVI DPADGRICGP GEPGELCCKG YNVMKGYYKM PEETARAIDA DGYLHSGDLG TVDEDGYYRV TGRIKDMIIR GGENVYPLEV ENFLLTMPGV LDAQVVGIPD PKLGELVGAF VRVRPGYEDM TEDDVRAFAI PRIARYKVPK RVFFVDDFPM TPSMKVQKFK LREMAEELVR AGK
|
| |