Gene Elen_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1818 
Symbol 
ID8416122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2138423 
End bp2140114 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content63% 
IMG OID645024789 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_003182172 
Protein GI257791566 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.122494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.361334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG AAGCCATCAC CGCCCCCGTC CCGGGCGATC CAGACTACCC GCTGCACTCC 
GAGAAGACCA TCGGCCGCTA CTTCCGCGAT CAGGTGGCTG TAGATCCCGA TCACGAGTTC
GTCGTGTATC CCGACCGCGC GTTGCGTTGG ACGTACAAGG AGTTCGACGA GCGCACCGAC
AACCTGGCGC GCGGCTTGCT CGCCATCGGC ATGCGCCCAG GCGATCACCT CGGCGTGTGG
GCGCGCAACA TCCCCGACTG GCTGACGTTC ATGTACGCCA CGGCCAAGAT CGGCGTGGTC
ATGGTCACGG TGAACCCCGT GTACAAGAGC CACGAGCTTG ACTACGTGCT GAAGCAGTCG
GACATGAAGG CGCTGTGCGT CATCGACGCC TATCGCGACG TGGACTATCT GAAGATCATC
CGAGATCTCG TGCCCGAGAC GCTCACGCAG CAGCGCGGCT ACCTGGAGTC CGAGAACTAC
CCCTTCCTCA AGAACATCAT CTACATGGGT CCCGAAAAGC ATCGCGGCTG CTATAGCGTG
CCGGAGCTCG TGCTGCTGGG AAGCCATGTG CCCGAAGAGG CGTTGGCAGA GGCGGAAACC
CATTTCGACA ACAACGACGT GGTGATGATG CAGTACACGT CCGGCACCAC GGGCTTTCCG
AAGGGCGTCA TGCTCACGCA CCGCAACATC CTGAACAACG GCTTCTATAT CGGCGAAGGC
CAGAAGCTCG GACCCGACGA CCGCGTGACG CTGCCCGTTC CGTTCTTCCA CTGCTTCGGT
TGCGTGCTGG GCGTCATGGC GAACCTTACG CACCGCTCCA CCATGATCAT CGTGGAGGAG
TTCGACGCGG GGCTCGTGCT GCAGGCCGTA CATAAGGAGC GCGCCACCAG CGTCTACGGC
GTGCCCACCA TGTTCATCGC CGAACTCAAC CACCCCGACT TCGATACGTT CGATCTGTCC
AGCCTGCGCA CAGGCATCAT GGCCGGCAGC CCCTGCCCGC CCGAGACCAT GCGCGAGGTC
ATGGACCGCA TGTACATGAA GGAGATCACC ATCTGCTACG GCCTCACCGA GACGAGCCCC
GTGTTCACGC AGACCAGCGC CGACGACGAC ATCGAGCACA AGTGCGAGAC GGTGGGGCGC
AAGCATCCTC CGGTGGACGT GCGCGTGATC GACCCCGCCG ACGGCCGCAT CTGCGGACCT
GGTGAGCCTG GCGAGCTGTG CTGCAAGGGC TACAACGTGA TGAAGGGCTA CTACAAGATG
CCCGAGGAGA CGGCGCGTGC CATCGACGCG GACGGCTACC TGCATTCGGG CGACCTCGGC
ACGGTGGACG AGGACGGCTA CTACCGCGTT ACCGGGCGCA TCAAGGACAT GATCATCCGC
GGAGGCGAGA ACGTGTACCC CTTGGAGGTG GAGAACTTCC TCTTGACCAT GCCCGGCGTG
CTGGACGCCC AGGTGGTGGG CATTCCTGAT CCGAAGCTGG GCGAGCTCGT GGGCGCGTTC
GTCCGCGTGC GCCCCGGTTA CGAGGATATG ACCGAGGACG ATGTGCGCGC CTTCGCCATT
CCGCGCATCG CTCGCTACAA GGTGCCCAAG CGCGTGTTCT TCGTGGACGA TTTCCCTATG
ACCCCGTCCA TGAAGGTGCA GAAGTTCAAG CTGCGCGAAA TGGCCGAAGA GCTGGTGCGA
GCAGGCAAGT AG
 
Protein sequence
MTTEAITAPV PGDPDYPLHS EKTIGRYFRD QVAVDPDHEF VVYPDRALRW TYKEFDERTD 
NLARGLLAIG MRPGDHLGVW ARNIPDWLTF MYATAKIGVV MVTVNPVYKS HELDYVLKQS
DMKALCVIDA YRDVDYLKII RDLVPETLTQ QRGYLESENY PFLKNIIYMG PEKHRGCYSV
PELVLLGSHV PEEALAEAET HFDNNDVVMM QYTSGTTGFP KGVMLTHRNI LNNGFYIGEG
QKLGPDDRVT LPVPFFHCFG CVLGVMANLT HRSTMIIVEE FDAGLVLQAV HKERATSVYG
VPTMFIAELN HPDFDTFDLS SLRTGIMAGS PCPPETMREV MDRMYMKEIT ICYGLTETSP
VFTQTSADDD IEHKCETVGR KHPPVDVRVI DPADGRICGP GEPGELCCKG YNVMKGYYKM
PEETARAIDA DGYLHSGDLG TVDEDGYYRV TGRIKDMIIR GGENVYPLEV ENFLLTMPGV
LDAQVVGIPD PKLGELVGAF VRVRPGYEDM TEDDVRAFAI PRIARYKVPK RVFFVDDFPM
TPSMKVQKFK LREMAEELVR AGK