Gene Elen_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1788 
Symbol 
ID8416092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2097139 
End bp2098821 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content71% 
IMG OID645024759 
Productbeta-lactamase 
Protein accessionYP_003182142 
Protein GI257791536 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.358741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.761746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGCC GGAGCGAAAG ACCGACGTGC GGTATCGTCG CGGCCGCGGT GGCGGCGGCT 
TTGGCCGCAT GCGCGCTTCT GCTGCCGTCC TGCGCGTCGG GGGAGGCGAC CGTCCTGCCG
CTTGCAGGCG GCGAGGCGGC CGTGTCGGAG GACGGCGCGG CGAGCGAGGC CGAGTCCGGA
GGTGCGACCG AGGCGAAGGC TTCGGACGAC CCGGAGGATC CCGGCGACGC GGAGGCGTCC
GCCGCCGATC TCGACGAGGC CGACGAAGGG GCGTCTCCCG AAGGGCTCGA GCCTACGGGC
GATGAGCTGG CCGCGCGCAT GGACGCCTAC TTGGCCGCGA ACTTCCCGCG AGCGGGTGCG
CCCGGGCTGG CGGTAGCGGT GGTGGATGCC GGCGGCGTGC GCTACCTGCG CACGTTCGGC
GACTGCCCCG ACGCGGACGC GCCTTTCGTC GTGGGCTCTC TCAGCAAATC GTTCACGGCG
GTGGCCGTCA TGCAGCTGGT TGAGCAGGGC GCGGTGGATC TGGACGCGCC CGCGTCGCGC
TACGCCCCGG GCTACGACGT GCCCGACGAG GTGACCGTGC GCAGCCTGCT CAACCAAACG
AGCGGGTTCG GCGCCTACGA TTCGCTCGCG GAAGCCGCCG ACGGCGAGCT GGGAGAGACG
TTCGGGGCGT TCTCGTACGC GAACGCGAAC TACGACCTGC TGGGGCGCGT GGTGGAAGGA
GCCTCGGGCG AGGACTACGC TCGTTACCTG GATGAGCACG TGCTGGAGCC GCTCGGCATG
GCTTCGACGA CGGCCGATCC GGCGCGAGCG GAGGCGCTCG GCATGGTGCC GGGCCATCGC
GACTGGTTCG GGCTGCCTGT GGCCGATGGG TTCCGGCATG CCCAAGGCGA CGGCGCATGG
GGCGGTCCCG CGTCGGGCTA CGTGGCTTCC AGCGTGCGGG ATATGGCCTC CTACCTGCGG
ATGTATCTAA ACGGCGGCAT GGGCGGCGAC GGCGCGCGCG TGCTGTCCGC CGACAGCGTG
CGGCGCATGT TCCTCGACCG CGTTCCCGAC CCCGAGGGCG ATACGTATTA CGGCATGGGC
TGGACGTCGT TCTCGTGGGA CGACGGCGAG CTTGTGCTGT CCCACGACGG GCAGGTGGAG
AACTACACTG CCAGCATGTG CCTGCTGCCC GAGCGCGGCA TCGGCATCGT GGCGCTGAGC
GACGCCAACG ACAACGCGGG CGGCAACATC CGGTTCTTCG ACCTGGTCGG CGGGGTGGTG
TCGGTCGCCA TCGGCGGGAC GGGGCAGCCG ATGGACGATG CGTGGACATG GGCGTGGCGC
CAACGCGTCG ACGTGCTGTA CGCGAGCGCC CTGCTTCTCG CCGTCTCGCC GTTGCTGCTG
ACGGGTCGGT GGCGGCGCCG GCTTTCCGCA GCGTGCAGGG GAGGCGTCGC GCCGATCGTA
CGCGCCCGGT CGCTGCGCAT GCTGCTCGTG CGAGGCGTCT TGCTGCACGT CGCGCTCCCC
GCTTGCATCC TGGCGCTTCC TTTCGTCTGG GGCGTTCCGT GGCGCGACCT GCTGACGTTC
TCCCCCGACG TGTCGACGGT GCTTCTGGCG AGCGCGGGGC TGCTCGTCGT CGCAGGCGCG
GTGAGGCTGG CGGCGGCCGT AACGCTTCGA AACGACGAGC CGCCGCCTTC GATCATGCGG
TAA
 
Protein sequence
MGRRSERPTC GIVAAAVAAA LAACALLLPS CASGEATVLP LAGGEAAVSE DGAASEAESG 
GATEAKASDD PEDPGDAEAS AADLDEADEG ASPEGLEPTG DELAARMDAY LAANFPRAGA
PGLAVAVVDA GGVRYLRTFG DCPDADAPFV VGSLSKSFTA VAVMQLVEQG AVDLDAPASR
YAPGYDVPDE VTVRSLLNQT SGFGAYDSLA EAADGELGET FGAFSYANAN YDLLGRVVEG
ASGEDYARYL DEHVLEPLGM ASTTADPARA EALGMVPGHR DWFGLPVADG FRHAQGDGAW
GGPASGYVAS SVRDMASYLR MYLNGGMGGD GARVLSADSV RRMFLDRVPD PEGDTYYGMG
WTSFSWDDGE LVLSHDGQVE NYTASMCLLP ERGIGIVALS DANDNAGGNI RFFDLVGGVV
SVAIGGTGQP MDDAWTWAWR QRVDVLYASA LLLAVSPLLL TGRWRRRLSA ACRGGVAPIV
RARSLRMLLV RGVLLHVALP ACILALPFVW GVPWRDLLTF SPDVSTVLLA SAGLLVVAGA
VRLAAAVTLR NDEPPPSIMR