Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1788 |
Symbol | |
ID | 8416092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 2097139 |
End bp | 2098821 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645024759 |
Product | beta-lactamase |
Protein accession | YP_003182142 |
Protein GI | 257791536 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.358741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.761746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGCC GGAGCGAAAG ACCGACGTGC GGTATCGTCG CGGCCGCGGT GGCGGCGGCT TTGGCCGCAT GCGCGCTTCT GCTGCCGTCC TGCGCGTCGG GGGAGGCGAC CGTCCTGCCG CTTGCAGGCG GCGAGGCGGC CGTGTCGGAG GACGGCGCGG CGAGCGAGGC CGAGTCCGGA GGTGCGACCG AGGCGAAGGC TTCGGACGAC CCGGAGGATC CCGGCGACGC GGAGGCGTCC GCCGCCGATC TCGACGAGGC CGACGAAGGG GCGTCTCCCG AAGGGCTCGA GCCTACGGGC GATGAGCTGG CCGCGCGCAT GGACGCCTAC TTGGCCGCGA ACTTCCCGCG AGCGGGTGCG CCCGGGCTGG CGGTAGCGGT GGTGGATGCC GGCGGCGTGC GCTACCTGCG CACGTTCGGC GACTGCCCCG ACGCGGACGC GCCTTTCGTC GTGGGCTCTC TCAGCAAATC GTTCACGGCG GTGGCCGTCA TGCAGCTGGT TGAGCAGGGC GCGGTGGATC TGGACGCGCC CGCGTCGCGC TACGCCCCGG GCTACGACGT GCCCGACGAG GTGACCGTGC GCAGCCTGCT CAACCAAACG AGCGGGTTCG GCGCCTACGA TTCGCTCGCG GAAGCCGCCG ACGGCGAGCT GGGAGAGACG TTCGGGGCGT TCTCGTACGC GAACGCGAAC TACGACCTGC TGGGGCGCGT GGTGGAAGGA GCCTCGGGCG AGGACTACGC TCGTTACCTG GATGAGCACG TGCTGGAGCC GCTCGGCATG GCTTCGACGA CGGCCGATCC GGCGCGAGCG GAGGCGCTCG GCATGGTGCC GGGCCATCGC GACTGGTTCG GGCTGCCTGT GGCCGATGGG TTCCGGCATG CCCAAGGCGA CGGCGCATGG GGCGGTCCCG CGTCGGGCTA CGTGGCTTCC AGCGTGCGGG ATATGGCCTC CTACCTGCGG ATGTATCTAA ACGGCGGCAT GGGCGGCGAC GGCGCGCGCG TGCTGTCCGC CGACAGCGTG CGGCGCATGT TCCTCGACCG CGTTCCCGAC CCCGAGGGCG ATACGTATTA CGGCATGGGC TGGACGTCGT TCTCGTGGGA CGACGGCGAG CTTGTGCTGT CCCACGACGG GCAGGTGGAG AACTACACTG CCAGCATGTG CCTGCTGCCC GAGCGCGGCA TCGGCATCGT GGCGCTGAGC GACGCCAACG ACAACGCGGG CGGCAACATC CGGTTCTTCG ACCTGGTCGG CGGGGTGGTG TCGGTCGCCA TCGGCGGGAC GGGGCAGCCG ATGGACGATG CGTGGACATG GGCGTGGCGC CAACGCGTCG ACGTGCTGTA CGCGAGCGCC CTGCTTCTCG CCGTCTCGCC GTTGCTGCTG ACGGGTCGGT GGCGGCGCCG GCTTTCCGCA GCGTGCAGGG GAGGCGTCGC GCCGATCGTA CGCGCCCGGT CGCTGCGCAT GCTGCTCGTG CGAGGCGTCT TGCTGCACGT CGCGCTCCCC GCTTGCATCC TGGCGCTTCC TTTCGTCTGG GGCGTTCCGT GGCGCGACCT GCTGACGTTC TCCCCCGACG TGTCGACGGT GCTTCTGGCG AGCGCGGGGC TGCTCGTCGT CGCAGGCGCG GTGAGGCTGG CGGCGGCCGT AACGCTTCGA AACGACGAGC CGCCGCCTTC GATCATGCGG TAA
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Protein sequence | MGRRSERPTC GIVAAAVAAA LAACALLLPS CASGEATVLP LAGGEAAVSE DGAASEAESG GATEAKASDD PEDPGDAEAS AADLDEADEG ASPEGLEPTG DELAARMDAY LAANFPRAGA PGLAVAVVDA GGVRYLRTFG DCPDADAPFV VGSLSKSFTA VAVMQLVEQG AVDLDAPASR YAPGYDVPDE VTVRSLLNQT SGFGAYDSLA EAADGELGET FGAFSYANAN YDLLGRVVEG ASGEDYARYL DEHVLEPLGM ASTTADPARA EALGMVPGHR DWFGLPVADG FRHAQGDGAW GGPASGYVAS SVRDMASYLR MYLNGGMGGD GARVLSADSV RRMFLDRVPD PEGDTYYGMG WTSFSWDDGE LVLSHDGQVE NYTASMCLLP ERGIGIVALS DANDNAGGNI RFFDLVGGVV SVAIGGTGQP MDDAWTWAWR QRVDVLYASA LLLAVSPLLL TGRWRRRLSA ACRGGVAPIV RARSLRMLLV RGVLLHVALP ACILALPFVW GVPWRDLLTF SPDVSTVLLA SAGLLVVAGA VRLAAAVTLR NDEPPPSIMR
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