| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1764 |
|---|
| Symbol | |
|---|
| ID | 8416068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 2068716 |
|---|
| End bp | 2072786 |
|---|
| Gene Length | 4071 bp |
|---|
| Protein Length | 1356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645024735 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_003182118 |
|---|
| Protein GI | 257791512 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.420285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.647474 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTACCGGT ACGCGGGCGA CCTTGCCGCG GGGGTCGACG TTCCCGACGA CCCCCGCGCT
TCTCAGGAAG AGCAGTATTA CTTGTATGGC GGCGAGTTCG GAACCATGAA GGGCGCGGAC
GTCCTGAACG CCTGGAATCG CGTTGCGGGC GGCTCCGACG TGACGGTCGC GGTGTTCGAC
AGCGGATGCC GGCTCGATCA CGAGGACCTG GCGGGCACGC TGCTCACGGA CCTTGCCTAC
GATGCGGCTA GCCGAAAGCC TTTGAAGGAC TTCGAGGCGA AAGATCAGGA TGCGAACGGG
CACGGCACGG CGGTCGCGGG TTTGGTGGGC GCTCAGTCGG GTAACGGCAA AGGCATAGCC
GGAACGGGTT TCAACGCCCG CCTGCTTCCC GTCAAGGTGC ACAACCCGCT CATCGGGAGT
CCCGACACCG CCACCGTGCT CAAGGGCATC TCCTATGTCG CGAACCTCGT CAGAACCGAG
CGGCCCAAGG GCAACGACTT CAACCTTCGC GTTGCGAACA TGTCCTTCAT CTCCTATCCG
GGAGCAGGGG AGGAGGGCGA TCCCGCCCTG CATCGGGCCA TTCAGGACTT GCGCGCCGAG
GGTGTGATGA CGGTGGCCGC CGGAGGCGAC GGCGACGGGT CGGGGAACGC GAAGACGGAG
TACGGGTATC CGTCCGACTT CCCCGAGGTC GTGGGCGTGA CGGCCTTGGA GCAAACGGGT
CGAAACGCGC CGTGGTCCGA CTACAACGAC AAGAAGGACC TGTCCGCTCC CGCCGTCGAC
CTCGCCACGA CGTTGGCGGA CGCGCCCGAT GCCTACGGAA GGTTTTCGGG AACGTCCGGC
GCAAGCCCCA TCGTGGCAGG CGTCGCCGCG CTCCTGATGA CCGCCAGCCC CGATTTGACG
GTCGACGAAG CCGAACGGGT GCTCGAGGGC ACGGCGGACG AGATCCAAGA CCCCGATAAC
GGCAGGAGAG CGCTTTCGGG AAGCGCGGGC GCGGTGAACG CGTCCAAGGC TATCGACAGC
GTTCTCCCGG CGGCGGTCGT GGACGTGAAC GACTTGCAGC TCGACCCTAT TCCCGACCAG
CGGTACGCGA ACCAGGCCTT GGAGCCGGAT GTCGTTTTGC GTACCGCTGA TGGCGCGCGG
ACGCTCGTGA ACGGGCAAGA CTACGCGCTT TCCTACGAGA ACAACGTGCG GGCGGGCACG
GCGAGCGTCA CCATCGCGGG AAGGGGCGCC TACACCGGTT CGCGCAGCGC CACGTTCGAG
ATAACCCCCA ACCTGTCGAA CCTGGTCCTG GTGGTGCGCT TCCAAGGCGA TACCTCGGGA
GACGGCGACA CGGGCCTCAA CGCGCCGTAT GCATCCTATC GGCCGGAGAC GAAGTGGCAA
GCGTTGCAGG AATTCTACAA CAACCCTGAG CCGAAGTTCA CTCCCGCCAA GAACTACTTC
GGCATCAGCA TGCGCGGGTT CCTCTACGCT TCCTCGCAAG GGGCGGTGGA CACGCTGAGC
TACTTCCCCC AATCGCTTGG CAACGGCAAG GTCGCCTGCA TCACGCTCGA CCGCCCCCGA
AGCTACTATG ACGTGTTCAA CGGCGATTTC AATCTTTTCA ACGACACGCT TGAGAAATTC
GCTCAGCAGT ACCCGGACTT CGATCCGAAG TATCTCGATC CGTCGGGTGA CGGGATCATA
GAGAACGTGA CGATCATTCC GGACGTAGGC ACCCAAGCGC CGATCCGCGG AAACGCGCTG
TCCCCTCACA AATTCAACCT GGGAGGGCAT GGCCTGTCCG TCGGCAGCGG GGCTTCCGCG
AAGCAGGTGG CGAACGTCAA CGTCAACGAC ACGCTGACCG TAGCGGGGAC CTCGTCGAAG
GTGATCACTC ACGAGTTCAT ACACTCGCTG GGCATATACG ACTATTATCG CAAAGACGAG
CAGGTTAGCG GATCGAAGCC GGTCGGGTAT TGGGACATCA TGAGCGATAC GGGTTTGTTC
CAACCCTTGG CCATCACCCG CCAGGATCTC GGATGGACGA CGATTCAGCA GGAGAGCCAA
TCAGGCCGGT TCACGCTGAG CGAATTGGGT TCGGGCGGGC AGCAGGCCAT CATGTTTAAA
TCCCCCTTTT CGGATAACGA GTACTTCGTC GCGGAATATC GAAAGAAGGG CGACTACGGT
CAAATCGACT CGAACATCAC TGGTTCGGGC GTCATCGTGT ACCGCGTGAA TCCCGCGTAC
CGCGACTGGG GAAACTGGGG CAAAGACGAC TACATCTACG TCTTCCGCCC GGGCGAGACG
GGCGTGCGCG ATGCCAAGGG GGATATCAGG GATGCTCAGA TATCGCTTGC CGGGGGCACG
TTCCGCTCCT CGGTCGGCTC AAGCGACATG ACCCAAGGCA TCACCGACGG GGCGATCGTG
CTTTCCGACG GGCGCAACAC CGGCATCGTG GTGAGCGCCG TGGAAGAGGG TGCCGATTCA
GTCACCATCG ATCTGTCGCT GCCCGTCACT TCCGAGGACG ATCTCTGGCC GTTGATCGGA
GACGAGAGCG GAAGCACGCA GTTCGGCAGC GATGTGCAGG ACGTGAGCAC CGTCAGCGGC
GACGGAGGAT TGTACACCCT CGTCCAACAG GGGAGCGGAC GCAATTCCTC CTTTCTCGTG
ATGGAGACGC GCGAAGGCGA CCAGGGCGAC CGGCTCGTTC CGCTGGGGAA CCAGATCTCG
GGAACGTACA TGACCAACGC CAGTTTGGCG ATCCACCAAG GTTCGCTCTA CTTCCTGGCG
ACCAACGGCG ACGACATGAA CCAGGCGCTT CTCAAGCGTT TCGACAAGGC CTCGAACGCA
TGGGTCGACG TCGCCCAGGT GTCAACGAGG ACCTATATCC AAAGCCCCTG CGCTATGGCT
TCGGTGGCGG ACTCGCTCTA CGTGCTGGTG GCAACCTTGG GCAGGAACGG CGAGGGGCCG
CAGGTGTACC GTCTCGCCGA GGGGGCAGGA GGATCGACCT TCGAGAAGGT GGAGGATCCT
TTGCCGGTCG ACTACATCCT GGCCCCGCAG CTATTCGAGT TCGACGGAGC GCCCGCTATC
GCGTGCGGCG ACAACGATGG AACGGGTCAG AGCTCGACCC ATCTGATTCG CTTGATGCCG
GAGGGCTCAT GGTCGAAGCT CGACCTACCC CATGCTTCGG AGGCTGCAGG CTCCGTCGAT
GCCGTCGTGC ACGCCGGCAA GCTGTACCTG CTTGCGGCGT TCGGCAATCA GGCTGCAGGA
GCCCCTGCTC CTCGCCTGTA CGTCATCTCC CCAGAGGGCC AGGTGGAAAT CTACAAAGAG
CTTTCATGGC TGACCTACGG GTTGCGCAAA TACAGCGCCC TGGAGGTGAG CGGCGACAAC
CTCTATGTAT CCGCGGTGAT GGGGCGGGGT CCCGTCAACG TTGTGGACGT CTACTCCGTG
CCGTTGGCGA AGGTCGTGGG AGGGCAAGAC CTGTCGTCCC TCGACCAGTG GGAGCAGCTT
GGGCAGACGG CGTACAGTCC AACTTCTAAG ATCGTCACCG CCGTGAAGGA CGGCCGCCTC
TATCTGGGCG CCGTCAACGA GGGAAGCAGT CGGGCCGTGT TCGTGTCGCA TGCCCTGCTT
CCAGGTCGAT CGATCATCTC CGTGACCATG CCGTCGTCGG TGCAATTCTC CATCGATAAG
GGCGCTGCGG ACGCGAACGC CCCGCTTCCC GCGACCGACG GGAACGGGTC GGCGACGTTC
GCCATACGCA ACAACTCCTC CACCGCTGTT CGAGCGTTCG TTTCGAGCGT GTCGGTCGCC
GATGCGAGTT TGGTGAGTCG CCAAGAGGAT CTGACGGCGA ACCGCTCGCT CATGCTGGGC
ATGGGCGATG TCGCGGGTGG GGCGTTCGCA GGTTGGTTGC CAGCGGTGTC GCAAGGCGCC
CCTGCGACCG ATATCGTGTA CTACCCTTTC AACGCGGCGG GACAAGGGGT CATCGAGGGG
AACTCCTCAA GCCCCTCCGT CGGCTTGTTC GGTAGGCTGG GAGATGCGGG CTGGGAGGAT
CGGGCAACCT TCACGGTGAC TCCGACCTTC ACGGTGGCGA TGCGCCAATA A
|
|---|
| Protein sequence | MYRYAGDLAA GVDVPDDPRA SQEEQYYLYG GEFGTMKGAD VLNAWNRVAG GSDVTVAVFD
SGCRLDHEDL AGTLLTDLAY DAASRKPLKD FEAKDQDANG HGTAVAGLVG AQSGNGKGIA
GTGFNARLLP VKVHNPLIGS PDTATVLKGI SYVANLVRTE RPKGNDFNLR VANMSFISYP
GAGEEGDPAL HRAIQDLRAE GVMTVAAGGD GDGSGNAKTE YGYPSDFPEV VGVTALEQTG
RNAPWSDYND KKDLSAPAVD LATTLADAPD AYGRFSGTSG ASPIVAGVAA LLMTASPDLT
VDEAERVLEG TADEIQDPDN GRRALSGSAG AVNASKAIDS VLPAAVVDVN DLQLDPIPDQ
RYANQALEPD VVLRTADGAR TLVNGQDYAL SYENNVRAGT ASVTIAGRGA YTGSRSATFE
ITPNLSNLVL VVRFQGDTSG DGDTGLNAPY ASYRPETKWQ ALQEFYNNPE PKFTPAKNYF
GISMRGFLYA SSQGAVDTLS YFPQSLGNGK VACITLDRPR SYYDVFNGDF NLFNDTLEKF
AQQYPDFDPK YLDPSGDGII ENVTIIPDVG TQAPIRGNAL SPHKFNLGGH GLSVGSGASA
KQVANVNVND TLTVAGTSSK VITHEFIHSL GIYDYYRKDE QVSGSKPVGY WDIMSDTGLF
QPLAITRQDL GWTTIQQESQ SGRFTLSELG SGGQQAIMFK SPFSDNEYFV AEYRKKGDYG
QIDSNITGSG VIVYRVNPAY RDWGNWGKDD YIYVFRPGET GVRDAKGDIR DAQISLAGGT
FRSSVGSSDM TQGITDGAIV LSDGRNTGIV VSAVEEGADS VTIDLSLPVT SEDDLWPLIG
DESGSTQFGS DVQDVSTVSG DGGLYTLVQQ GSGRNSSFLV METREGDQGD RLVPLGNQIS
GTYMTNASLA IHQGSLYFLA TNGDDMNQAL LKRFDKASNA WVDVAQVSTR TYIQSPCAMA
SVADSLYVLV ATLGRNGEGP QVYRLAEGAG GSTFEKVEDP LPVDYILAPQ LFEFDGAPAI
ACGDNDGTGQ SSTHLIRLMP EGSWSKLDLP HASEAAGSVD AVVHAGKLYL LAAFGNQAAG
APAPRLYVIS PEGQVEIYKE LSWLTYGLRK YSALEVSGDN LYVSAVMGRG PVNVVDVYSV
PLAKVVGGQD LSSLDQWEQL GQTAYSPTSK IVTAVKDGRL YLGAVNEGSS RAVFVSHALL
PGRSIISVTM PSSVQFSIDK GAADANAPLP ATDGNGSATF AIRNNSSTAV RAFVSSVSVA
DASLVSRQED LTANRSLMLG MGDVAGGAFA GWLPAVSQGA PATDIVYYPF NAAGQGVIEG
NSSSPSVGLF GRLGDAGWED RATFTVTPTF TVAMRQ
|
|---|
| |