| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1733 |
|---|
| Symbol | |
|---|
| ID | 8416032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 2040447 |
|---|
| End bp | 2041118 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645024699 |
|---|
| Product | peptidase membrane zinc metallopeptidase putative |
|---|
| Protein accession | YP_003182087 |
|---|
| Protein GI | 257791481 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2738] Predicted Zn-dependent protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.39909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.00797114 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGAT TGAGCAACGG ATACCTGCTG CTGATCGTCG TCACGCTGGC CATCGGCGGC
CTTGCAACCT GGTACGTGAA CTCCCAGCTT AAGAAATACA CGCACGTGCC CATATCCACG
GGCCTCACCG GCGCCGAGGC TGCGCGCCGC ATGCTCATGT ATTACGGCAT CGGCGACGTC
GAGGTGCATC GCGGCGGTCC CGGCCAGGAC TTCTTCGACC CGCGGACGAA CTCCGTCACG
CTGTCGCCCG ACGCCTACGC CGGCCGCTCC ATCACGGCCA CGGCCACGGC GTGCCACGAG
GTGGGCCACG CCTGCCAGTA CGCGCAAGGC TACGCTCCCA TGAAGATCCG CGGCGCGCTG
GTGCCTGTGG TGAACCTGGC GTCGAACGCG TGGATCTTCC TGTTGATGAT GGGCATCTTC
CTGAACATCG CCGGCCTCAC CACGGCCGCC ATCGTCATGT ACGCCGCGGT GGTCATCTTC
CAGCTGGTCA CGTTGCCGGT GGAGTTCAAC GCCTCGCAGC GCGCGATGGC CTACATGAAC
ACGACGGGCC TGCCCCAGGC CGAGCAGGCG GGCTCGTTCA ACGTGCTGCG CGCCTGCGCC
CTCACCTACG TGGCGGCCGC CCTCACCTCC ATCCTGCAGC TGCTGTGGCT GCTCGGCCAG
CGCCGGGACT AG
|
|---|
| Protein sequence | MFGLSNGYLL LIVVTLAIGG LATWYVNSQL KKYTHVPIST GLTGAEAARR MLMYYGIGDV
EVHRGGPGQD FFDPRTNSVT LSPDAYAGRS ITATATACHE VGHACQYAQG YAPMKIRGAL
VPVVNLASNA WIFLLMMGIF LNIAGLTTAA IVMYAAVVIF QLVTLPVEFN ASQRAMAYMN
TTGLPQAEQA GSFNVLRACA LTYVAAALTS ILQLLWLLGQ RRD
|
|---|
| |