Gene Elen_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1677 
Symbol 
ID8415976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1979399 
End bp1980157 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content68% 
IMG OID645024644 
Productpeptidase C60 sortase A and B 
Protein accessionYP_003182032 
Protein GI257791426 
COG category[S] Function unknown 
COG ID[COG4509] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03064] sortase, SrtB family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0763151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0326953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTCG TCGTGCTGCT GGCGGTGCTG CTCGCCGGGG CGGCGGCGGG GTTCGGCTAT 
CTCGCCTGGC AACGGCAGCA GGCGGCCGAT GCGGTGCGCG CGGTCGAGCG CGAGCCGCTG
CCGGCGGTGG AGCGCGCCTA CGACGCGCCT GCGGACGAGC CGGCGGAGAA TCCTATCGAC
TTCGAGGCGC TGCGCCGGGA GAGCCCCGAC GTCTACGCGT GGCTCTACGT GCCGAACACG
AACGTCAACC TTCCCGTGCT CCAGCGGCCG GGAGACGACT TCTTCTACCT CGATCACGAC
CGCTACGGCG AGCCGGCCGT CGAAGGTGCG GTGTTTTCCC AGATGGCGAA CGCGACCGAC
TTCTTCGATC CCGTCACCGT GCTGTACGGC CACAACATCG TGAACGACGC GATGTTCGCC
ACGTTGCATG CCTACGAGGA CCCGGCGTTC TTCGCCGACA ACCCCGAGCT GTACGTTTAC
CTGCCTGATC GCATCCTCGC CTACGAGGTG GTGGCGGCCT ACGAGTACGA CGACCGGCAC
ATCCTCAACT CGTTCGACTT CTCCGACCCC GCCGTGCGGA CGGGCTACTT CGCATCGGTG
CTCGCGCCCG ACGACCCGAA GGCGAACGTG CGCGACGGCG CGCAGCTCGA TGCCGACGAC
CGCATCGTGC AGCTCAGCAC CTGCCGCTCG GCCCTGACCA GCGACCCGGT GCGCTATATC
GTCACGGCCG TGCTCGTGGG CGAGAAGCCT GCTGCGTGA
 
Protein sequence
MALVVLLAVL LAGAAAGFGY LAWQRQQAAD AVRAVEREPL PAVERAYDAP ADEPAENPID 
FEALRRESPD VYAWLYVPNT NVNLPVLQRP GDDFFYLDHD RYGEPAVEGA VFSQMANATD
FFDPVTVLYG HNIVNDAMFA TLHAYEDPAF FADNPELYVY LPDRILAYEV VAAYEYDDRH
ILNSFDFSDP AVRTGYFASV LAPDDPKANV RDGAQLDADD RIVQLSTCRS ALTSDPVRYI
VTAVLVGEKP AA