| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1650 |
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| Symbol | |
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| ID | 8415949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Eggerthella lenta DSM 2243 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013204 |
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| Strand | - |
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| Start bp | 1951612 |
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| End bp | 1952604 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645024619 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_003182007 |
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| Protein GI | 257791401 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.464846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0220296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGATA TGCACGCGTT CTTCCGGAGC CGCCGTCTGC TGCTCGCCCC CATGGCGGGC
GTGAGCGACG AGGCGTTCCG CACGCTCTGC CGCGAGCAGG GCGCCGACCT CACCTACACC
GAGATGGTGT CGGCCAAGGG TCTTTCCTAC GCGAACGAGA AGACGCGGCA TCTGCTGCGC
CTCGCGCCGG GGGAGGACCA GGTGGCCGTG CAGCTGTTCG GCCACGAGCC CGACACGATG
GCCGCCCAAG CTGCGTGGAT CGAGCGCGAG ATGGGGCAGT CGCTGGCCTA CCTCGACATC
AACATGGGCT GTCCGGCCAG AAAGATCGTG TCGAAGGGCG ACGGCTCGGC GCTCATGAAG
GATCCGGCGC TGGCCGCCTC CATCGTGCGC GCGGTGCGCG CAGCGGTGAG CCGCCCCGTC
ACGGTGAAGT TCCGTCGAGG GTGGGCCGAG GGCGACGAAA CCGCCCCCGA GTTCGCTCGG
AGGATGGAGG ACGCGGGCGC CTGCGCCATA GCCGTGCACG GGCGCTATGC CGAGCAGCTG
TACCGCGGGC GCGCCGAGTG GGGCGCTATC GCGCGGGTGA AGGAGGCCGT GAGCGTGCCC
GTCGTGGGCA ACGGCGACGT GAGAAGCGGC GCCGACGCCG TGGCCATCAC GGAGCGCACC
GGCTGCGACG CCGTGATGAT CGCGCGTGCC GCCGAGGGAA ACCCTTGGCT GTTCGCCCAG
GCCAAGGCTG CGCTTGCGGG CGAGCCGGAG CCTGACGGGC CCACCGTGGA GGAGCGCATC
GCGCTCGCGC GCCGCCACGC GCGGCTGCTC AGCGCGCGTG AAGGCAGGAA CATCGTGCGC
ATGCGCAAGC ACGCTATGTG GTACCTGGCG GGGCTGCCCG GCGCCGCCGC CGCGCGCGGC
AGGATCAACG GCTGCGTGTC CGTGGAGGAT TTCGACGAGG TGTTCGACGA GCTGCTGGCA
TGCGCGAGGG AGCATGCCGC CGCCCACGAG TGA
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| Protein sequence | MEDMHAFFRS RRLLLAPMAG VSDEAFRTLC REQGADLTYT EMVSAKGLSY ANEKTRHLLR
LAPGEDQVAV QLFGHEPDTM AAQAAWIERE MGQSLAYLDI NMGCPARKIV SKGDGSALMK
DPALAASIVR AVRAAVSRPV TVKFRRGWAE GDETAPEFAR RMEDAGACAI AVHGRYAEQL
YRGRAEWGAI ARVKEAVSVP VVGNGDVRSG ADAVAITERT GCDAVMIARA AEGNPWLFAQ
AKAALAGEPE PDGPTVEERI ALARRHARLL SAREGRNIVR MRKHAMWYLA GLPGAAAARG
RINGCVSVED FDEVFDELLA CAREHAAAHE
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