Gene Elen_1646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1646 
Symbol 
ID8415945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1947247 
End bp1948122 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content71% 
IMG OID645024615 
Productprotein of unknown function DUF558 
Protein accessionYP_003182003 
Protein GI257791397 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.600892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00800846 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCCTGC AGCATTTCTA CCTGCACGAC CAGGTGCTTG CCGACGAGGG GGCGCCGACT 
TTCCCGCTGC GTTTGTCGCC GGACGACGCG AAGCACGCCC GCGTGCTGCG GCTTGCGCCG
GGCGAGCATA TCGCGGTGGT GGACGCCGCG CAGGACTACT TCGAGTGCGA GATCGCCGCT
TTCGACGATG CGGTCCCGGT GGTGCGCATC GCGCAGCGCC TCGACGACGA GGAGCGCCCC
CTCGTGATGC TCGTGCAGGG CCTGGCCAAG GGCGACAAGA TGGAGACGGT GATCCGCCAC
GCCACCGAGC TGGGCGTTTC GGCGTTCGTT CCGATGTCGT GCGAGCGCTC CATCGTGAGG
CTCGATGCGA GGAAGGCCGC GGCGAGGACG CAGCGATGGC GCGCCATCGC GAAGAGCGCG
GCCATGCAGT CCGGCCAGCG CGCGTGTCCC GAGGTGGGCG AGCCGATGGC GCTGGCGGAT
GTGTGCGCCT CCTTGGCGCA CGCCACCGCC GTGCTGGTGT GCTGGGAGGA GGCGCTGCTG
GACGCGCGCA TCGAGAAGGC GCTCGAGCGC GGCCTCCGGC TCGACCGCGC GCTTCCCGAG
AACGCGCGCA TCGCCGTGGT GGTGGGCCCC GAAGGGGGCC TTTCGCGAAG CGAGGCGGAC
GCGCTCCTGG CCTGCAACCC GCGTGCGTCG CTCGTGTCGC TGGGCTCGTC CATCCTGCGA
ACCGAGACGG CCGGCATCGT GGCTCCCGCG CTCGTCCTGC ACGAGCTGGG CCGCATGATG
CACGACGCGC GCGAAGCGCA GGAACGCACG TCCGCCCATG TCGAAAGCCG TCGCGAGGAA
GCCGGGGACG CGTGCGAGGC AGGCGGGCAA TCGTGA
 
Protein sequence
MSLQHFYLHD QVLADEGAPT FPLRLSPDDA KHARVLRLAP GEHIAVVDAA QDYFECEIAA 
FDDAVPVVRI AQRLDDEERP LVMLVQGLAK GDKMETVIRH ATELGVSAFV PMSCERSIVR
LDARKAAART QRWRAIAKSA AMQSGQRACP EVGEPMALAD VCASLAHATA VLVCWEEALL
DARIEKALER GLRLDRALPE NARIAVVVGP EGGLSRSEAD ALLACNPRAS LVSLGSSILR
TETAGIVAPA LVLHELGRMM HDAREAQERT SAHVESRREE AGDACEAGGQ S