| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1604 |
|---|
| Symbol | |
|---|
| ID | 8415903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1903635 |
|---|
| End bp | 1904249 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645024573 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003181961 |
|---|
| Protein GI | 257791355 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1584] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00253793 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000000000267396 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGAGA TGAAGAAGGA AGAGCGGGGC TCGTGGGCTG ATCCGAGCGC TCTAGGGTTG
TTCGGGCTGG CGATAGTCAC GCTCGTGGCC TGTTCTCAAA AACTCGGCAT CACCGACGGG
ACGGCGGCTG TCATGGGGTG GGCCATTTTC CTCGGGGGAT GCGCTCAGCT TATCGCCGGA
TTGATCGATT TGAGGAAGAA CAACGCATTC GGCGGCACCG CGTTTATCGC TTACGGGTTG
TTTTGGCTTG CCATGGCATT CGGCTGGGCG ACGACCAACG GCATGTTCGG CTCTTATGCG
GCCGAAACGT TCGATCCGCG CCAAACAGGA GCCGCTTTCG TGGCGTACCT CATCTTGACT
GCGTTTATGA CCATAGGAGC GCTGCGTACC ACGAAAGTGC TGTTCTTCAT ATTCCTCGCC
ATTGATTTTC TGTTCGTCGG CTTGGCTCTA AGCGCGTTCG GGGTTGCTCG GGAAGCGACG
CATATGCTCG CCGCGATCAG CGAGCTTGTT ATTTCGCTCC TCAGCTTCTA CTGCGCGGGC
GCCAATATCT TGAACAACCA CTTCGGGGAG CAATTCCTAT CGCTCGGCAA CCCCTTCTGG
TCGAAAAAAT CCTGA
|
|---|
| Protein sequence | MGEMKKEERG SWADPSALGL FGLAIVTLVA CSQKLGITDG TAAVMGWAIF LGGCAQLIAG
LIDLRKNNAF GGTAFIAYGL FWLAMAFGWA TTNGMFGSYA AETFDPRQTG AAFVAYLILT
AFMTIGALRT TKVLFFIFLA IDFLFVGLAL SAFGVAREAT HMLAAISELV ISLLSFYCAG
ANILNNHFGE QFLSLGNPFW SKKS
|
|---|
| |