Gene Elen_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1597 
Symbol 
ID8415896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1896146 
End bp1896622 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content66% 
IMG OID645024566 
Productprotein tyrosine phosphatase 
Protein accessionYP_003181954 
Protein GI257791348 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0000018039 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCGC CGCATCGCAT CCTATTCGTG TGCCACGGCA ACATATGCCG TTCAACCATG 
GCTGAGTTCG TGATGAAGGA TCTCGTCTCG CGCCGAGGCA TGGCCAACGC CTTCGTCATC
GGGTCGGCAG CCACGCACGA CGACGAGATC GGCAGCCCCG TGCATCACGG CACCCGCGCC
GTGCTGGAAG CGCAGGGCAT CGATTGCTCC GGCAAGACCG CCCGTCGCCT GCGCCGCGCC
GATGCTGACG AATGGGACCT GTTCGTAGGC ATGGACGAGG CGAACATGCG CGACATGCGT
CGCCAGCTGG GACGGGCTGC GGAGGGCCGC TGCTTCAAGC TGCTCGAGTT CGCCGATTCC
GCGCGTGACG TGGCCGATCC TTGGTACACA GGCGATTTCA ACGTCACGTA CGACGACGTG
CTGGCCGGTT GCGCGGGGCT TCTCGCGTGG TTGGACTCCG GCGCGCCCCG CTCGTAG
 
Protein sequence
MSAPHRILFV CHGNICRSTM AEFVMKDLVS RRGMANAFVI GSAATHDDEI GSPVHHGTRA 
VLEAQGIDCS GKTARRLRRA DADEWDLFVG MDEANMRDMR RQLGRAAEGR CFKLLEFADS
ARDVADPWYT GDFNVTYDDV LAGCAGLLAW LDSGAPRS