| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1562 |
|---|
| Symbol | |
|---|
| ID | 8415860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1857075 |
|---|
| End bp | 1858295 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645024530 |
|---|
| Product | phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase |
|---|
| Protein accession | YP_003181919 |
|---|
| Protein GI | 257791313 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
|---|
| TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0275488 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0463187 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAATG TGAACGAAGG CGCGGCAAAC CCCGCGCAGA AGACCGTGCT TTTGGGCGTG
ACGGGGTGCA TCGCCGCCTA CAAATCGTGC GAGATCGTGC GGGGCCTGCA GAAAGCGGGC
GTGCGCGTGA AGGTGGTCAT GACCGAGCAT GCCACCGAGT TCGTGGGACC CACGACGTTC
CGTGCGCTTA CGCACGAGAC GGTGGCCGTG GGCCTGTTCG ACGACCCGTC CGACCCCATC
CACCACGTGT CGCTCGCGCA GGAGGCCGAC GTGTTCCTCA TCGCGCCGTG CACCGCGAAC
GTCATCGCGA AGATCGCGAA CGGCATCGCC GACGATCTCT TGACCACCAC GGCGCTGGCC
ACCACCGCGC CGCTCGTCAT CGCGCCGGCC ATGAACGTGA ACATGTACGA GAACGGCGCC
ACGCGCTACA ACATAGGCAA GCTGCATATC CGCGGCGCGC GCTTCATCGA CGCAGGCGAC
GGCTACCTGG CGTGCGGCGA CATCGGCAAG GGCCGGTTGG CCGAGGTGGA CGACATCGTG
TCGGCAACGC TGGACGAGCT GGGCGTGAAG CGCGACCTGG CCGGGCGCAG TGTCATGATC
ACCGCGGGCC CCACGGTTGA GCCCATCGAC CCGGTTCGCT ACATCTCGAA CCACTCCTCC
GGCAAGACCG GCTACGCCCT CGCGCGCGCG GCGGCCCTGC GCGGCGCCGA CGTGACGCTA
ATCTCGGGCC CCGTGTCGCT GGCGGCGCCG CAGGGCGTGC ACATGGTGCA CGTGAAGACG
GCGCGCGACA TGTTCGCGGC GGCCGAGGAC GCTTTCGAAG ACGCCGACAT CGCCATCTTC
GCGGCAGCGG TGGCGGACAT GCGTCCGCGC GAGGCGGCCG GGCATAAGCT GAAGAAGGGC
ATCGCCGACG CCGAGCTGGG CACCATCGAC CTCGTCGAGA ACCCGGACAT CCTGGCCACG
CTGGGCGAGC GCAAGGAGCA GCAGGTGGTG GTGGGCTTCG CCGCCGAGAC GAACGACGTG
GTGGCGAACG CCGAGAAGAA GCTCGTATCC AAGCACGCCG ATCTGGTGGT CGCTAACGAA
GTGGGAGGCG GTCGCGCGTT CGGTGCCGAC GACAACGTGG TATGGTTCGT GGACGATCAG
GACGTCGAGG AGCTTCCCCG CATGTCCAAG ACCCGTCTCG CCGACGAGAT TCTCAACAAG
GCCATGCAGT TCCTGGCGTA G
|
|---|
| Protein sequence | MTNVNEGAAN PAQKTVLLGV TGCIAAYKSC EIVRGLQKAG VRVKVVMTEH ATEFVGPTTF
RALTHETVAV GLFDDPSDPI HHVSLAQEAD VFLIAPCTAN VIAKIANGIA DDLLTTTALA
TTAPLVIAPA MNVNMYENGA TRYNIGKLHI RGARFIDAGD GYLACGDIGK GRLAEVDDIV
SATLDELGVK RDLAGRSVMI TAGPTVEPID PVRYISNHSS GKTGYALARA AALRGADVTL
ISGPVSLAAP QGVHMVHVKT ARDMFAAAED AFEDADIAIF AAAVADMRPR EAAGHKLKKG
IADAELGTID LVENPDILAT LGERKEQQVV VGFAAETNDV VANAEKKLVS KHADLVVANE
VGGGRAFGAD DNVVWFVDDQ DVEELPRMSK TRLADEILNK AMQFLA
|
|---|
| |