Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1550 |
Symbol | |
ID | 8415848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 1841187 |
End bp | 1842134 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645024518 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_003181907 |
Protein GI | 257791301 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.213106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0477313 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGTTC AAACAAGCGA GGCCATAGAG GGGGCGCCGG CGGATCAGCG CCGCCCCGCC GTGCGCGGGC ATGCGCTGGC GTTGGTCACC GTGGTGGTGT GGGCGGTCAC GTTCGTATCC ACGAAGGTGC TGCTCGTGCA CCTCGCACCC ATCGAGATCC TGTTCTTCCG CTTCGTCATC GGGTTCGTCG CGCTCGCGCT CCTGCGCCCG CGCATCCTGC ACGTCCGGGG CTTCAAGGAG GAGCGGTGGT TCATGCTGGC GGGCGCTACC GGCGTGACGG TGTACTACCT GCTGGAGAAC ATCGCGCTCA CGTTCACCAC GGCCTCCATC GTGGGCGTGG TGGTGGCCGC GGCGCCGCTG TTCACCGGCG TCGCGTCGGC TGTCGTGCTG AAAGAGCGCC TGCGCGCGCC GTTCTTCGTC GGCTTCGCGG TGGCCATGGC GGGCGTGTGC CTGGTCAGCT TCGCGGGCGG CGCGTCGGGC GGCCTTGTCG CAGAAGGCGG GCTGGGGCAG GCGGGGCTCA TCGGCGTGGC GCTGGCCTTG GCGGCGGCGG GCACGTGGGC CGTGTACTCC ATCGTGACGA AGAAGCTCTC GACGTTCGGC TACGACAGCA TCCTCGTCAC GCGCCGCACG TTCGCCTGGG GTCTCGCGTT CATGCTTCCC GCGCTGCCGC TTCTGGGCTT TTCGCCCGAT TGGGGCTCGC TCGCCGCGCC CGAGATGTGG GGCAACCTCG TGTTCTTGGG GCTGGGCGCG AGCGCGCTGT GCTTCGTGAC GTGGAACATG GCGGTGAAGG AGCTGGGGCC GGTGAAGACG AGCCTGTACA TCTACCTCGT GCCGGCGCTC ACCGTGCTGG CCTCGGCCGC CGTGCTGGGC GACCCGCTCA CCCCGCCGGT CGTCGCCGGA GTCCTGCTTA CTATAGCAGG GCTGTTCCTT TCCGAGCGCG GGAAGTAG
|
Protein sequence | MAVQTSEAIE GAPADQRRPA VRGHALALVT VVVWAVTFVS TKVLLVHLAP IEILFFRFVI GFVALALLRP RILHVRGFKE ERWFMLAGAT GVTVYYLLEN IALTFTTASI VGVVVAAAPL FTGVASAVVL KERLRAPFFV GFAVAMAGVC LVSFAGGASG GLVAEGGLGQ AGLIGVALAL AAAGTWAVYS IVTKKLSTFG YDSILVTRRT FAWGLAFMLP ALPLLGFSPD WGSLAAPEMW GNLVFLGLGA SALCFVTWNM AVKELGPVKT SLYIYLVPAL TVLASAAVLG DPLTPPVVAG VLLTIAGLFL SERGK
|
| |