Gene Elen_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1527 
Symbol 
ID8415825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1821343 
End bp1822416 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content61% 
IMG OID645024495 
Productintegrase family protein 
Protein accessionYP_003181884 
Protein GI257791278 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.115316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCT ACATGAACGG GAAGACGGGC TCCTGGTACG TCCAGTGCTA CTACAGCGAC 
ATCGACGGCA ACCGCAAGCA CAAGGTGAAA CGGGGGTTCG CGACCAAGGG CGATGCCTTG
GCGTGGGAGG CTGATTTCCT GGCCTCTGCC GACGGGTCCA TGTCGATGCC CTTCGAGGCG
TTCGTGAAGA GGTACTCCGA AGACGTGAGG CCAAGGCTCA AGCTCAACAC CTGGCTCACC
AAGGAGCACA TCATCCGCAC GAAGATAGTG CCGTTCTTCG GGCCGAAGAG GATGTGCGAC
ATCACCCCCA AAGACGTGGT TGACTGGCAG AACAGGATGG TGGGCTCGTA CGACGACGAG
GGGAAGCCGT ACAGCGGCAC CTACCTGAGA ACCATAAACA ACCAGCTGAG CGCCATCTTC
AACCACGCGG TCAAGTACTA CGGCCTGGGA AAGAGCCCCG CCACCCCGAC AATCAAGATC
GGCGAGCGGA AAGGCGCAGA GATGAGGTTC TGGACGAAGG AGCAGTACCT CGCGTTCAGC
GAGGAGGTGA TGGACAAGCC AGCCAGCTTC TACGCGTTCG AGATCCTGTA CTGGTGCGGC
TTGAGGGTCG GCGAGCTCCT CGCCCTCGAA CCGAACGACA TCGACCTTGG AAAGTGCCTC
ATCCACGTCA CCAAGAGCTA CCAGCGGATT CGGAGGAGGG ACGTCATCAC CTCCCCCAAG
ACGCCCAAAT CGAAGAGGGA TGTGGTCATG CCGGAGTTCC TCGCGGACGA GCTCGCCGAT
TTCCTCGGAT CCATCCCTGA GGAGCGGCGC GCCTGCCGCA TCTTCTGCTT CACCAAAAGC
TACCTGCACC ACGAGATGAA GCGCGGCTGC GCCGCATGCG GGCTCGAGCC CATCCGGATC
CACGACCTTC GCCACAGCCA CGTCTCGCTC CTCATAGAGA TGGGGTTCAG CGCGATCGCC
ATAGCGGACC GGCTGGGGCA CGAGACCTAC GAGATGACGC TTCGCTACGC CCACCTCTTC
CCCAGCAAGC AGTCGGACAT GGCAGCGGCG CTCGACCAGG GAAGGAGGCC CTGA
 
Protein sequence
MPAYMNGKTG SWYVQCYYSD IDGNRKHKVK RGFATKGDAL AWEADFLASA DGSMSMPFEA 
FVKRYSEDVR PRLKLNTWLT KEHIIRTKIV PFFGPKRMCD ITPKDVVDWQ NRMVGSYDDE
GKPYSGTYLR TINNQLSAIF NHAVKYYGLG KSPATPTIKI GERKGAEMRF WTKEQYLAFS
EEVMDKPASF YAFEILYWCG LRVGELLALE PNDIDLGKCL IHVTKSYQRI RRRDVITSPK
TPKSKRDVVM PEFLADELAD FLGSIPEERR ACRIFCFTKS YLHHEMKRGC AACGLEPIRI
HDLRHSHVSL LIEMGFSAIA IADRLGHETY EMTLRYAHLF PSKQSDMAAA LDQGRRP