Gene Elen_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1462 
Symbol 
ID8415760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1745474 
End bp1747660 
Gene Length2187 bp 
Protein Length728 aa 
Translation table11 
GC content67% 
IMG OID645024431 
ProductYhgE/Pip C-terminal domain protein 
Protein accessionYP_003181820 
Protein GI257791214 
COG category[S] Function unknown 
COG ID[COG1511] Predicted membrane protein 
TIGRFAM ID[TIGR03061] YhgE/Pip N-terminal domain
[TIGR03062] YhgE/Pip C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTAACG TGATCCGCAT CGTGCGCAGC GACTTCAAGC GGCTGTTCGC GAACGCGATG 
AGCGTGATCA TCGTGATCGG GCTCGTGGTG ATGCCGTCGA TCTTCGCGTG GTACAACGTC
ATCGCGTGTT GGAACGTGTT CGACAACACG GGCAACCTGA CGGTGGCGGT AGCGAACGTC
GACGACGGCT ACGAGAGCGA TCTCGTGCCT TTGCGCGTGA ACATCGGCGA GCGGGTGGTG
TCGGCTCTGC GAGCAAATGA CCAGATCGAC TGGACGTTCA CCACCGAGGA GGACGCGGTG
GACGGCGCGC GGTCGGGACG CTACTACGCG GCCGTGGTCA TCCCCGCGGG GTTCAGCAAG
GATATGCTGA CGTTCTACTC CGAGGACGTG CAGCACGCCC GTATCGTCTA CTACGCCAAC
GAGAAGAAGA GCGCTATTGC GCCGAAGATC ACCGATCAAG GTGCCGATTC GGTATCGTAC
CAGGTGAACG AGGTGTTCGC CCAGACGTTG TCAGAAGTGG CGCTGGGCAT CGCCGAGTCG
ATGTCCGCCT ACGCCGACGA GGCAGACGTG GGCGGGCGCA TTGCGGGTGT GTCGGGGAAA
GTGCGCGACA TGGGAGCGCA AGCCGAACGG ATGGCGTCGG TGCTGGAACT GTATTCGTCG
CTGGCCGGCG CTGCGCAGAC GCTCGCGAGC GACTCGGGCA AGCTGGTAGT CGCAGCGCAA
AACGGGGTCG ATGGCCTCGA CGCCGCATCG TCTCAGGGCT CTACGTCGGC CTCCGACCTG
GTGACGGCCG TGAAAGGGTC GGTCGACGAC CTTGCGGGCG CACTCGACGG TGCTGCCGCG
CGCTTCGACG AGGTGTCTGC CTCCGCAGGG GCGCTGTTCG ACGCCGCCTC GACCGGTGCC
GCGCAGGGCG CGGCAGGGCT GCGGGGCCAG GCCGAAGCTG TGGACGCGCA GATCGCGCGG
TACCGTAGCG CCATAGAGCA GCTCGAGGAG CTGCGAGGCT CGTTGCCTTC CGATGCCCAG
CAGGCGCTCG ACGCCGTCAT CGCGCGCATG AGCGCCGTCG TCTCGCTTAT GGAGGGCATG
CGCGACAACC TGGGCGCCGC AGCCGAGAGG CTGGAGGCTG GAAACGCCGA CGTGGAGGCT
CAGCGCGCGG AGGTCGAACG GCTTGCGGCT GAGGCGCGGC AGGCCTCCGA CGACCTCGCA
GCCTCGTTCG ACAGCGGGCT CAAGCCGGGC TTGCAGCAGC TCGCGGACAG CGCGGGCGTG
CTTGCGGCTA ACATGGGAGA CGGCCTGGAC GGTCTGCGCT CGTCGGGCGC CGATCTGTCC
GCGTCCGCAG GGTCGGCCGC CGACGTGCTG GGCGATGCGC GCGCGAAGGT GGACGAGGCG
GCGCAGAAGT TGCGCGAAAC GGCGCGCGAG CTGGATACGC TCGCCGACGG CGTGGACGAG
GCGCTGGTCG CGGGCGACGC GGACGCGCTG CGCGCGGTGC TGGGCGCCGA CGCGCAGCTC
TTGTCGAAGG CGCTCGCAGC GCCGGTGGGC ATCGAGCGCG AGGCCGTGTT CCCGGCTGAG
AACTTCGGTT CGGCCATGGC CCCGCTGTAC ACGACGCTCG CCCTGTTCAT CGGGTCGCTT
TTGATCCTCG TGGTGGTGAA GCCGACGGTT TCCGACCGCA CCCGCGAGCA GCTGTCCGAC
CCGCAGCCGC GCCAGCTGTT CATGGGGCGC TTCGGCGTGC TGGCGTTCTT GTCGCTCGCG
CAGACCACGG TGATGGGCTT GGGGAACCTG CTGTTCTTGC AGGTGCAGGT TGCCGAGCCC
GCGCTGTTCA TGCTGTGCTT CTGGATAGCC GGCCTCGTGT TCACGTTCCT GATATACGCG
CTGGTGGCGG CGTTCGCGAA CCTCGGCAAG GCCGTGGCGG TGCTGCTGTT GATCATCCAG
GTGACGGGGT GCGGCGGGTC GTTCCCGCTG CAGCTACTGC CGCCGTTCGT GCAGGCCCTG
AGCCCCTGGC TTCCCGCCAC GCACGTGGTG AACGCCATGC GGGCGGCCAT GTTCGGCACC
TACGGCGCCG ACTTCTGGAC GGAGATCGGG CTGCTCCTGC TGTTCCTGAT CCCCGCGGCG
CTCATCGGCC TCGTGCTGCG CAAACCCCTC GCCAAGTTCA TGACCTGGTA CGTCGAGCAG
GTAGAGTCGT CCAAGCTCGT AGGGTAG
 
Protein sequence
MGNVIRIVRS DFKRLFANAM SVIIVIGLVV MPSIFAWYNV IACWNVFDNT GNLTVAVANV 
DDGYESDLVP LRVNIGERVV SALRANDQID WTFTTEEDAV DGARSGRYYA AVVIPAGFSK
DMLTFYSEDV QHARIVYYAN EKKSAIAPKI TDQGADSVSY QVNEVFAQTL SEVALGIAES
MSAYADEADV GGRIAGVSGK VRDMGAQAER MASVLELYSS LAGAAQTLAS DSGKLVVAAQ
NGVDGLDAAS SQGSTSASDL VTAVKGSVDD LAGALDGAAA RFDEVSASAG ALFDAASTGA
AQGAAGLRGQ AEAVDAQIAR YRSAIEQLEE LRGSLPSDAQ QALDAVIARM SAVVSLMEGM
RDNLGAAAER LEAGNADVEA QRAEVERLAA EARQASDDLA ASFDSGLKPG LQQLADSAGV
LAANMGDGLD GLRSSGADLS ASAGSAADVL GDARAKVDEA AQKLRETARE LDTLADGVDE
ALVAGDADAL RAVLGADAQL LSKALAAPVG IEREAVFPAE NFGSAMAPLY TTLALFIGSL
LILVVVKPTV SDRTREQLSD PQPRQLFMGR FGVLAFLSLA QTTVMGLGNL LFLQVQVAEP
ALFMLCFWIA GLVFTFLIYA LVAAFANLGK AVAVLLLIIQ VTGCGGSFPL QLLPPFVQAL
SPWLPATHVV NAMRAAMFGT YGADFWTEIG LLLLFLIPAA LIGLVLRKPL AKFMTWYVEQ
VESSKLVG