Gene Elen_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1362 
Symbol 
ID8415660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1627617 
End bp1628798 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content74% 
IMG OID645024331 
ProductChloride channel core 
Protein accessionYP_003181720 
Protein GI257791114 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00220045 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.308625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCACTC TGTCCACGGG GTTCGCGCAA AGCCTTCCGG CCCGTTTTCC CTGGCTGCTG 
CTGGCGCTGC CGGTCCTCGG CGCGCTGTCC GTGGGGCTGT ATCGTCTGCT GCGCCTGCCC
GCGGCCCTGA CCACCGAAGG CGTCGTCGAC GAGCTGCGCG CGGGCCGTCG CGTCCCGGGA
AGCCTTACGG TCGGGATACT GGGCGGCAGC TGCCTTACGC TGCTGGGCGG CGGCTCGGTC
GGCATGGAGG CGGGCGCGCT GCAGATGGGC GCGTCGACGG GCTCCGTGCT GGGCCGCGCG
TTCAAGCTGC CGCCCGCGCG CGGCCGCGAC GGCGCTTCCG ACGGCTATCC GGGCGCCATC
GGCATGGCCG CGGCGTTCAG CGCCCTGTTC TTCGCCCCGT TGGGGTCGTG CATGTTCGTG
CTGGAGCTCG TGCGCTTCGA CCGCGCGGTG CTGCGGCATG CGCCCGCCAT GCTGGCAGCC
GCCCTCGTCG CCTACGCCAT CGCCCGCGCC GTCGGCATCG GCGACCATAT CCCGCGGGTG
GCGCTGCCCG GCCTTTCGTG GGCCGTCGCC GCGCACTGCC TGCTGGTGGG CCTGTGCTGC
GCCGTGGGCG GCGCGCTGTT CGCCGCCTGT CTGCGCGCGC TGCGCCGCGC GTGGCGCCGC
CGGGCAAAGG CTCGTCCGTT CGCGCTGGTG GCCGTGGGCG GCCTTGCGTT CGCGGGTATC
GTGCTGGCAT GCGGCTGGCA GGCGTTCCAG GGCACGGGCA TGGGCCTTCT GCGCGGGGCG
CTTGCGGGAA GCGCCGCTCC GGCCGACTTC GCCGTGAAGG CGGGGCTCAC CGTGCTCGTG
CTCGGCTTCG GCTTCAAGGG CGGCGAGATC ATGCCCATGT TCTCCATCGG AGCGCTGCTG
GGCTGCTCGC TGGGGCTGGC CACGGGCGCG CCGGCGGGAT TCTCGGCCGC GCTCGGCATG
GCGGCGTTCT TCGCGGCCGC CGGCCGCTGC CCGCTGACGG CGCTGCTCAT GGGCGCCGAG
ATATTCGGCT GGGCGTCGCT TCCGTTTCTG CTGATAGCGG TGGCTGCGGC GTACGCCGGC
AGCTACGACG TGGGCGTGTT CGGCCGCGGC GCGGCAAGCG AGCTCGCGCG CGTGCGCCGG
CGTGCGCGGC GCGACGAGCC GTCGCTCGAG GAGGATCGAT GA
 
Protein sequence
MLTLSTGFAQ SLPARFPWLL LALPVLGALS VGLYRLLRLP AALTTEGVVD ELRAGRRVPG 
SLTVGILGGS CLTLLGGGSV GMEAGALQMG ASTGSVLGRA FKLPPARGRD GASDGYPGAI
GMAAAFSALF FAPLGSCMFV LELVRFDRAV LRHAPAMLAA ALVAYAIARA VGIGDHIPRV
ALPGLSWAVA AHCLLVGLCC AVGGALFAAC LRALRRAWRR RAKARPFALV AVGGLAFAGI
VLACGWQAFQ GTGMGLLRGA LAGSAAPADF AVKAGLTVLV LGFGFKGGEI MPMFSIGALL
GCSLGLATGA PAGFSAALGM AAFFAAAGRC PLTALLMGAE IFGWASLPFL LIAVAAAYAG
SYDVGVFGRG AASELARVRR RARRDEPSLE EDR