Gene Elen_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1332 
Symbol 
ID8415630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1595615 
End bp1596943 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content69% 
IMG OID645024301 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_003181690 
Protein GI257791084 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.467827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCATG AAGCAAACGC CACCGTCGTC AACCCGCTGC CGGCGCCCCT GCGCGGCTCG 
GCCTCGGTCC CGGGCGACAA GTCCATATCG CACCGCGCCG TGCTGTTCGC CGCCATGGCC
GAGGGCACCT CGCGGCTTTC GGGCGTGCTC GACTCCGAGG ACGTGCGCTC GTCCATCAGG
GCCGTAGGCC AGCTGGGCGC GCAGGTGTCG CTCGAGAAGC AGCCCGACGG CAGCTTGGCG
GGAGGCGTCA CGGGGTGGGG CGCCGCCGGC CCCTCGCAGC CCGAGGCTCC CATCGACTGC
GGCAACTCCG GCACCACGGT GCGCCTGCTC ATGGGCGTGC TGGCGCCGTG GAACGTGCGC
GTGGAGCTGA CGGGCGACGA CTCGCTGCAG CGCCGTCCCA TGCGCCGCAT CACCGCGCCG
CTCATGAAGA TGGGCGCGCG CTTCGAGCCC GAAGGGCGCG AGACGCTGCC GCTCACGGTG
TGCGGCTCCG AGGGCCTGCG CGCGATAACC TACGACGCCC CCATGGCGTC GGCCCAGCTC
AAAACCGCGG TGCTGCTGGC CGGCGTGTAT GCGCGGGGCA CGACGACGCT CAACGAGCCC
TCGCCCTCGC GCAACCATAC CGAGCTCATG CTGCCCGAAT TCGGCGTGAC CACCACAGCG
GCCGACCGCA CGGCCAGCGT GACGGGTCCC GCTGCGCTTC GGGCCTGCGA GGTGCAGGTG
CCGGGCGATC CGTCTTCGGC GGCGTTCCTC GTCTGCGCTG CCGTGTTGAA GCCCGACAGC
TCCATCCAGG TGGAGAACGT CAGCTTGAAC ACCGCGCGCA TCGGGTTTAC GCGCACGCTC
GAGCGCATGG GCGCCGATAT CAGCGTGCGT CACACGGGAG CGGCGGGCAA GGAGCCCTAC
GGCATCGTTT CGGCGTGCTA CACGCCGAAC CTGCATGGGT GCGAGGTGCC GGCCGACAAG
ATCGCCACCA TCGTCGACGA AGTGCCGGTG TTGGCGGTCG TGGCGGCTCA CGCGCGCGGC
GTCACCGTGT TCCGCGAGGT CAGCGAGTTG CGCGTGAAAG AGACCGACCG CCTGGCCGCC
ATCGTGGAGG GGCTTGAGAC TCTCGGTGTG GACGCGTGGA TCGACGGCAA CGACCTGTTC
GTGGAAGGCC AGCCGGGCTT GCAAGTGCCC GTCGGCGCCG CATTCGACTC GAAGAACGAC
CACCGTCTGG CCATGACCTG GGCGCTCGCC GGCCTGTGCG GCAACGCTCC CGTCGAAGTG
GAGAACTTCG ACTCCGTGAA AATCAGCTAT CCGCAGTTCC TCACCGATAT CGAAAGGTTG
GCACGATGA
 
Protein sequence
MSHEANATVV NPLPAPLRGS ASVPGDKSIS HRAVLFAAMA EGTSRLSGVL DSEDVRSSIR 
AVGQLGAQVS LEKQPDGSLA GGVTGWGAAG PSQPEAPIDC GNSGTTVRLL MGVLAPWNVR
VELTGDDSLQ RRPMRRITAP LMKMGARFEP EGRETLPLTV CGSEGLRAIT YDAPMASAQL
KTAVLLAGVY ARGTTTLNEP SPSRNHTELM LPEFGVTTTA ADRTASVTGP AALRACEVQV
PGDPSSAAFL VCAAVLKPDS SIQVENVSLN TARIGFTRTL ERMGADISVR HTGAAGKEPY
GIVSACYTPN LHGCEVPADK IATIVDEVPV LAVVAAHARG VTVFREVSEL RVKETDRLAA
IVEGLETLGV DAWIDGNDLF VEGQPGLQVP VGAAFDSKND HRLAMTWALA GLCGNAPVEV
ENFDSVKISY PQFLTDIERL AR