Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1330 |
Symbol | |
ID | 8415628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 1593517 |
End bp | 1594365 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645024299 |
Product | pseudouridine synthase |
Protein accession | YP_003181688 |
Protein GI | 257791082 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.297072 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGAAT GTGGGGATCG TGTCGTTCCC ATGCGGTTGC AGAAGTTCCT TGCTCGGGCG GGGGCGGCTA GCCGGCGGGG GTCGGAGAAC CTTATGACGG CGGGGCGCGT GACCGTGAAC GGCAAGGTGG TGACCGAGCT GGGAAGCAAG GTGGATCCGC TCGTGGACGA GGTAGCGGTG GACGGCGCGG TCGTGCGCCT GGCCGACGGG CCCGTCACCA TCATGCTGCA CAAGCCGGCC GGGTTCGTCA CCACCATGTC CGATCCGCAG GGACGGCGTA CCGTGGCCGA GCTCGTGCCG ACCGAACGCT ATCCGGGGCT GTTCCCCATC GGGCGGCTGG ACTTCGACAC CACGGGCCTG CTGCTGTTCT CCACCGACGG CGAGCTGGGC AACGGCCTGC TGCATCCGAA GCATCATGTG ACGAAGCGCT ACCTGGCCTG CGTCGAGGGT CGTCCGACCG AGCGCGATCT GGCGCTTCTG CGGCGCGGCA TCGAGCTGGA CGACGGCCCG ACGCAGCCAG CCGACGTGCG CGTGGTGGAG GGCGGGGCGG CTCGCCATGC CGAGCGTCTG CTGGAGATCC CCGCCGCCGT GCCGCCGCGC TCCTCGAAGG AGTATGCGGC CGTGTGCGAA GGGCGCGCGA CGCGACGCTC CATCGTGCGC TTGGGCATCC GCGAGGGCCG TAAGCGCCAG GTGAAGCGCA TGCTGGCCGC CGTCGGCCAT CCGGTGCTGG CGCTTCATCG CGATTCGTTC GGCCCGCTCG AGCTGGGCGA TCTGCCGCGC GGGGCGTGGC GCGCGCTCGA TGCCGAAGAA GTGGCGGCGC TCCACCAGGC CATCGGACGT GCCGAATAA
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Protein sequence | MGECGDRVVP MRLQKFLARA GAASRRGSEN LMTAGRVTVN GKVVTELGSK VDPLVDEVAV DGAVVRLADG PVTIMLHKPA GFVTTMSDPQ GRRTVAELVP TERYPGLFPI GRLDFDTTGL LLFSTDGELG NGLLHPKHHV TKRYLACVEG RPTERDLALL RRGIELDDGP TQPADVRVVE GGAARHAERL LEIPAAVPPR SSKEYAAVCE GRATRRSIVR LGIREGRKRQ VKRMLAAVGH PVLALHRDSF GPLELGDLPR GAWRALDAEE VAALHQAIGR AE
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