Gene Elen_1323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1323 
Symbol 
ID8415621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1588184 
End bp1588654 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content69% 
IMG OID645024292 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_003181681 
Protein GI257791075 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID[TIGR00185] rRNA methylase, putative, group 2 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.431138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.429518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGGC CTTTGAACAT CGTGCTGGTG GAGCCGGAGA TCCCGCAGAA CACCGGCAAT 
ATCGCGCGTA CGTGCGCCTG CACGGGAGCG CGGCTGCACC TCGTAGAGCC CATGGGATTT
CGCCTGACGC AGAAGAACCT CGCGCGTGCG GGCTGCGACT ACTGGGACGA GGTGGATATC
GTGCGCTGGC CGTGCGCCGA GGCGTTCTTC GAGGCTCATG CGGCCGACGA GCTGCACCTG
TTCACCGGGC AGGCCTGTCG CGGGTTCGGC GACGTGGCGT ACGGGGAGGG ATCCTTCCTC
GTGTTCGGCC GCGAGAGCCG GGGCCTGCCC CTCGGCCTCA TCGAGGCGCA CGCGAACCGC
TGCGTGCGCA TACCCATGCG CGAGGGCCTG CGCAGCCTCA ACCTGTCCAA CGCCGTGGCG
GTGGCCGCCT ACGAGGCCCT GCGTCAGCAA GGTTGGCCGG GGCTGGGGTA G
 
Protein sequence
MTRPLNIVLV EPEIPQNTGN IARTCACTGA RLHLVEPMGF RLTQKNLARA GCDYWDEVDI 
VRWPCAEAFF EAHAADELHL FTGQACRGFG DVAYGEGSFL VFGRESRGLP LGLIEAHANR
CVRIPMREGL RSLNLSNAVA VAAYEALRQQ GWPGLG