| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1298 |
|---|
| Symbol | |
|---|
| ID | 8415593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1556802 |
|---|
| End bp | 1558142 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645024264 |
|---|
| Product | MATE efflux family protein |
|---|
| Protein accession | YP_003181656 |
|---|
| Protein GI | 257791050 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0534] Na+-driven multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGTCG TGGCCATCAA GCTATCCGAC CATTTCACCT ACGGGCGCCT CGTGCGCTTC
GCACTGCCCT CCATCGCCAT GATGATATTC ACGTCCATCT ACAGCGTGGT GGACGGCCTG
TTCGTGTCGA ATTTCGCCGG CAAGGAGGCG CTGGCGGCCG TGAACCTCGT GTTCCCGCTG
GCCATGGCGC TGGGCTCCAT CGGATTCATG CTGGGCACGG GCGGCGCCGC CCTGGTGGCG
AAGACGATGG GCGAAGGCGA TGCCGAGCGG GCGAACCGCC TGTTCTCGTT CATAACGATC
GCGGCGGCGG TGGCGGGCGC CGTCTTGATC GCGGTAGGCG CCGCAGCGCT CGAGCCGGTG
CTGCTCCTTT TGGGCGCTCA AGGCAGTCTT TTAGAGCAAG GCCTTCTGTA CGGGCGCATC
CTGCTGGTGG CGTTGCCCCT GTTCATCGTG CAGAACGTGT TCCTGAGCTT CTTCATCGCG
GCGGAGAAGC CGCAGGTGGG CTTCGCGGTG ACGGTCGCAG CGGGTGTGAC GAACATCGTG
CTGGACTACC TGTTCATCGC CGTTTTGGGC TGGGGGATAG CGGGCGCCGC GGTTGCGACC
GCGGCGGGCC AGGCGCTTGC CGCAGCGGTA TCGGTCGCGT TCTTCGCGCG CAGCAAGACG
AGCCGCCTTC GCTTCATGCG CCCGGCGGTG GACTTCCGCG CGCTGGGGAC GGCCTGCGTC
AACGGTTCGT CGGAGCTGAT GACCGAGGTG GCCGCGTCGG TGGTGAGCAT GCTGTACAAC
TACCAGCTCA TGATGCTGGC CGGCGCCGAC GGCGTGGCGG CGTACGGCGT GATCATGTAC
GTGAACTTCA TCTTCACGGC GGTGTTCTTC GGCTTCTCCA TGGGAACAGG GCCGGTGGTG
AGCTATCACT ACGGCGCGCA GAACCGGACC GAGCTCAAAG GGCTGTTCCG CAAGAGCTTC
ATACTGGTGG GAACCACAGG CGCCGCGATG TTCGCCGCCT CGCAGCTGCT GGCGGCGCCG
CTGGTGAGCG TGTTCGTGGG CTACGATCCG GAGCTCGCCG CCATGACGCT GCACGGGTTC
CGCATCTACG CGGTGGCGTT CCTCGTGTGT GGGTTCAACA TATACGGCTC GGCGTTCTTC
ACGGCGCTCA ACAACGGCAA GGTATCGGCG CTCATCAGCT TCATGCGCAC GCTCGTGTTC
GAAACGTCCA CGGTCATGCT GCTGCCCATC GTGTGGGGCA TCGACGGGGT GTGGAGCGCC
ATCATCGTGG CGGAGGCGTG CGCGCTCGTG CTGACGATGT TCTTCCTGGT GTACCTGCGC
AAACCCTACG GCTACGCGTA G
|
|---|
| Protein sequence | MIVVAIKLSD HFTYGRLVRF ALPSIAMMIF TSIYSVVDGL FVSNFAGKEA LAAVNLVFPL
AMALGSIGFM LGTGGAALVA KTMGEGDAER ANRLFSFITI AAAVAGAVLI AVGAAALEPV
LLLLGAQGSL LEQGLLYGRI LLVALPLFIV QNVFLSFFIA AEKPQVGFAV TVAAGVTNIV
LDYLFIAVLG WGIAGAAVAT AAGQALAAAV SVAFFARSKT SRLRFMRPAV DFRALGTACV
NGSSELMTEV AASVVSMLYN YQLMMLAGAD GVAAYGVIMY VNFIFTAVFF GFSMGTGPVV
SYHYGAQNRT ELKGLFRKSF ILVGTTGAAM FAASQLLAAP LVSVFVGYDP ELAAMTLHGF
RIYAVAFLVC GFNIYGSAFF TALNNGKVSA LISFMRTLVF ETSTVMLLPI VWGIDGVWSA
IIVAEACALV LTMFFLVYLR KPYGYA
|
|---|
| |