Gene Elen_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1294 
Symbol 
ID8415589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1553568 
End bp1554224 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content64% 
IMG OID645024260 
Productprotein of unknown function DUF1648 
Protein accessionYP_003181652 
Protein GI257791046 
COG category[S] Function unknown 
COG ID[COG5658] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.65227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACA TCCGTAAGGT TATCTACGCT CTGATCGTCC TCAACCTCGT CGTGGACGCG 
GCGTTTCTCG TGCTCGCGCC CGACCAGGTC GCCGTGCATT TCGGCGCGAG CGGCGAGGCG
GACCGCATCG GAAGCAAGTA CGAGCATCTA TGGTTTCCCG CGCTGGCGCT CGCGTTCGGC
CTGGGGCTTC CGTTCATCGC GAAACGAAGC GACGCGCACG ACGGCGACAA GCTCTTGAAG
GCCGATGTCG TGCTCTTGGC CCTGATGGCG GTGTTCTCGC TGTTCGTGTT CGCGGACGGG
CTCTCCAGCA GCGGCTCGCC GTTCGCAGCA CTCGACCTCA ACGTGGGAAG AGGCGCCGCC
CTCGTCGCGG GCATCGCCTT CGTCATCTGC GGCAACATCA TGCCGAAATC CGATCGAAAC
GAAGCCTTCG GCCTTCGCAC GCCCTGGAGC CTGAGCAACG ACGAGGTGTG GCGCAAATCG
CAGCGTTTCG GCGGGTACGC GATGATCGCC TCGGGCGTGC TGACCGTCGT AGCCGGGCTC
GCACTGCCCA TGAACTTGGT CATGCCCGCC ATGGTGGCCA TCCTCTTGGC GGCAGCCGGC
GCGAGCATCG TCGCCTCGTA CGTGTACTAC CGAAAGCACT ACGACTTCGC CGAGTGA
 
Protein sequence
MKNIRKVIYA LIVLNLVVDA AFLVLAPDQV AVHFGASGEA DRIGSKYEHL WFPALALAFG 
LGLPFIAKRS DAHDGDKLLK ADVVLLALMA VFSLFVFADG LSSSGSPFAA LDLNVGRGAA
LVAGIAFVIC GNIMPKSDRN EAFGLRTPWS LSNDEVWRKS QRFGGYAMIA SGVLTVVAGL
ALPMNLVMPA MVAILLAAAG ASIVASYVYY RKHYDFAE