| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1292 |
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| Symbol | |
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| ID | 8415587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Eggerthella lenta DSM 2243 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013204 |
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| Strand | + |
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| Start bp | 1549109 |
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| End bp | 1552594 |
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| Gene Length | 3486 bp |
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| Protein Length | 1161 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645024258 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_003181650 |
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| Protein GI | 257791044 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCATCG ATTCATTGAC GTTCACCCTG GAGAAATCGG GCTGCCTCGA CGCGTTCTGG
GGCAAGCTGG ACGCGGGCGA GGACGGCACG CTGGGCGTGG CCTCGTCGGC GCGCCCGTTC
CTCGTGGCGG CGCGGTTCGC GCACAGGCCC CAGCCGACGC TCGTCGTGGT GGCGGGCGAG
GACGCGGCCG TGGCGTTCTC GCGCAGCCTG GCGGCCTACC TGGGCGACGA GCGCGTCATG
CGCTTCCCCG AGCGCAGCGA CTACCCCTTC GTGCCGAAGC CCAGCGACCC TGCGCAGGTG
GCACGGCGCA TGGAGGCCGT GCACGCGCTG GCCAGCGGCC GCGAGGTCGT GGTGGTAGCC
AGCGCCCGCG CGCTCGTGCG CGCGCTGCCG CCGGCGGGCT CCGACGTGCA CGTGCCGGTG
GCGCTTTCGG CGGGCCGCGA GCTGGCGGCC ATGCCCGGCG CTCAGGCGGC GAGCGTCACC
GAGTTCGAGG ATTTTGCCCA TGCGCTGGAG GAGCGCGGCT ACCGGAACAC CGGCGAGCTG
GACGGCCCCG GCACCTTCGC CGTGCGCGGC GGCACGATCG ACGTGTTCCC CGGCAACCTC
GTGTACCCGG TGCGGCTGGA CTTCTTCGGC GACGAGCTGG AGGAGATCCG CCGCATCGTG
CCCACCACCG GGCAGACCAT CCAGGCGCTG CCGGACGTGA GCATCTACCC CGTGGTGGAG
TTCTCGTGCT CCAAGCGGGG GCTCGCCCGC GCGCGCCAGA AGCTGGAGCG GCCGGCCGCG
ACGAACCCCG TGCTGCGCGA CGTGCTGGAG AAGCTGGACG GCGGCCTGCG CTTCGACGGT
TCCGACATGC TGCTGCCGTA CCTGTACGCG ACCACGTCCA CGTTGGGCGA TTACGTGCGC
CCCGGCGCGC TGAGCGTGCT TTTGGAGCCG CGCTCGCTGT TCGACGACAT GAGCCACGCC
TACGACGACG CGGCGGGACG CGCGAAGGGA TCGAGCATCC CCGTGGACGG GCTGTACGCC
GAGCCCGGGG CCGTGAGCTT CGGCGAGGGG CAGCGCGCAA CCTACGTGTC CATCATGCGC
GTGGGCGGGC ACGTGGACGA CGAGCTGCCG GTGAAGCGCG TGGAGGTGGC GGGGCATCCC
GACAAGCTGT TCGGTCGGCT GCGCAGCCTC GTGGACACCG ACTACACGGT GGTGTTCAGC
GCGTCGAACT TCCGTGCGCG CCAGGACATG AAGCTGGCGT TCGTCGACCA CGGTCTGCCG
ATCCAAGAGA CGCTGGACGC GGAAGAGGAC GCCGACGAAC TGGAAGGTAT CGCCAAGCGC
CGTCTGCGGC GGGGCGTGGT TAACGTGGTG GACGTGGACG TCCCCCTGGG CATGATCATC
CCGAAGGCGA AGCTGGCCAT CGTCAGCCTG TCGGACACGC AGGGGGCGTC CACGTCGCGG
CCGTCGCGCC ACGTGGACAT CACCGAGATC ACCTTCCCGT ACCAGCCGGG CGACTACGTG
GTGCACGCCG CTCACGGCGT GGCCTACTTC AAGGAGCTGG TCCGCCGCGA CGTGGACGGC
ACCGCGCGCG ACTACCTGCT GCTGGAGTAC TCCGAGGGCG ACAAGCTGTA CGTGCCGGTG
GAGCAGCTCG ACCGCGTGAC GCGCTACGTG GGGCCGGAGG GCGCGAGCCC GCGCCTTACG
CGCCTGAACA CGGCCGATTG GTCGCGAGCG CTGGCCAAGG CGCGCAAGGC CACGAAGAAG
CTGGCGTTCG ACCTGGTGGA CGTGTACGCG CGCCGCGCGT CCGTGCAAGG CTACCGCTTC
GGGCCCGACA CCGCGGCCCA ACGCGAGATG GAGGAGGCGT TCCCCTACCA GGAGACGCCC
GACCAGCTGG CCGCCATCGC GGACGTGAAG GCCGACATGC AGTCGGCGAA GCCCATGGAC
CGCCTCGTCT GCGGCGACGT GGGCTTCGGC AAGACCGAGG TGGCCCTGCG CGCCGCGTTC
AAGGCGACGC AGGACTCCAA GCAGGTGATG GTGCTGTGCC CCACCACCAT CCTCGCGCAG
CAGCACTACA CCAACTTCAA GGAGCGCTGC GAGCCGTTCG GCGTGCGCGT GGAGGTGCTC
TCGCGCTTCC GCACGCCCGC GCAGCAGGCC GCCGCCCTCA AGGGCTTCCA GGAAGGTGAC
GTGGACGTGC TGGTGGGCAC GCACCGTTTG CTGTCGCGCG ATGTGAACCC GCACGACCTG
GGGCTGGTCA TCATCGACGA GGAGCAGCGC TTCGGCGTGG GCCACAAGGA GCAGATGAAG
AACCTGCGCG AGTCCATCGA CGTGCTCACG CTGTCGGCCA CGCCCATCCC TCGCACCATG
CAGATGTCGC TGTCGGGCGT GCGCGACATG AGCCTCATCC TCACGCCGCC CGACGAGCGC
CGTCCCGTGG AAGTGCACGT GGGCGAGTGG GATCCCGACG TGGTGAGCGG CGCTATCAGG
CGCGAGCTGG CGCGCGGCGG CCAGGTGTAC TACGTGTCGA ACCGCGTGCG CTCCATGGAG
GAGGCGGTGC GGCGCGTCAC CGCGGCCGCG GGCGAGGCGC GCGTGGGCGT GGCGCACGGG
CAGATGTCGA AGGAGCAGCT GGAGCGCGTG ATGGAGGACT TCAGCGCCGG CGAGCTGGAC
GTGCTGGTGG CCACCACCAT CATCGAGAGC GGCATCGACA ACCCGCACAC GAACACGCTC
ATCATCGAGG ACTCGCAGCG CTACGGATTG GCGCAGATGT ACCAGCTGAA GGGCCGCGTG
GGCCGTTCGT GCACGCAGGC GTACGCCTAC TTCATGTTCC CCGAGCACAT GGAGCTCACC
GAGGAGGCGG CCGCGCGCCT GACCGCGCTG AACGAGCATA CCGATCTCGG CAGCGGCATG
CGCATCGCCA TGCGTGACCT GGAGATCCGC GGCGCGGGCA GCCTGCTGGG CGCCGAGCAG
TCGGGCAACA TGTCCGCAGT GGGCTTCGAC CTGTTCGCGC AGATGCTGAA CCAGGCCGTG
AGCGCCACGC GCGAAGGCGA CCTCAAGGCC ATGGACGCGC TGCCGCCCGC GCTCAGCGAT
ATCACGGTGA ACGTGCCGGG GCACACCTAC CTGCCCGAAG AGTACGTGCC GGACGCCGAC
GAACGCGTGC TGTGGTATCG CAGGATAGCC TCGGCCGCCA CCGAGCAGGC CGTGGAGGAC
GTGCGTGCCG ACTTGGCCGA CAAGCGCCCC GACATGCCGC AGGCGGCGAA GAACCTGTTG
GAGAAGGCGC GCATCAAGGC CTACGCCAAC GAGCACCATA TCAAGACCGT GTCGGTGACG
GCGGGCAAGC TGGTGGTGGA GCCCATCGAC GTGCCCCGCG ACAAGATGAC GGGTCTGCGC
CGTGCTGGCG GCCGCTACCT GGCCGACAAG CGCAAGCTGT CGCTGCCGCT GCGCTACTTC
AAGCTGGACG AAGGCGACAA CCTCCTGGCC CCCGTAGCCG AGTTCCTGGA GGAGCTGGCG
AAATGA
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| Protein sequence | MLIDSLTFTL EKSGCLDAFW GKLDAGEDGT LGVASSARPF LVAARFAHRP QPTLVVVAGE
DAAVAFSRSL AAYLGDERVM RFPERSDYPF VPKPSDPAQV ARRMEAVHAL ASGREVVVVA
SARALVRALP PAGSDVHVPV ALSAGRELAA MPGAQAASVT EFEDFAHALE ERGYRNTGEL
DGPGTFAVRG GTIDVFPGNL VYPVRLDFFG DELEEIRRIV PTTGQTIQAL PDVSIYPVVE
FSCSKRGLAR ARQKLERPAA TNPVLRDVLE KLDGGLRFDG SDMLLPYLYA TTSTLGDYVR
PGALSVLLEP RSLFDDMSHA YDDAAGRAKG SSIPVDGLYA EPGAVSFGEG QRATYVSIMR
VGGHVDDELP VKRVEVAGHP DKLFGRLRSL VDTDYTVVFS ASNFRARQDM KLAFVDHGLP
IQETLDAEED ADELEGIAKR RLRRGVVNVV DVDVPLGMII PKAKLAIVSL SDTQGASTSR
PSRHVDITEI TFPYQPGDYV VHAAHGVAYF KELVRRDVDG TARDYLLLEY SEGDKLYVPV
EQLDRVTRYV GPEGASPRLT RLNTADWSRA LAKARKATKK LAFDLVDVYA RRASVQGYRF
GPDTAAQREM EEAFPYQETP DQLAAIADVK ADMQSAKPMD RLVCGDVGFG KTEVALRAAF
KATQDSKQVM VLCPTTILAQ QHYTNFKERC EPFGVRVEVL SRFRTPAQQA AALKGFQEGD
VDVLVGTHRL LSRDVNPHDL GLVIIDEEQR FGVGHKEQMK NLRESIDVLT LSATPIPRTM
QMSLSGVRDM SLILTPPDER RPVEVHVGEW DPDVVSGAIR RELARGGQVY YVSNRVRSME
EAVRRVTAAA GEARVGVAHG QMSKEQLERV MEDFSAGELD VLVATTIIES GIDNPHTNTL
IIEDSQRYGL AQMYQLKGRV GRSCTQAYAY FMFPEHMELT EEAAARLTAL NEHTDLGSGM
RIAMRDLEIR GAGSLLGAEQ SGNMSAVGFD LFAQMLNQAV SATREGDLKA MDALPPALSD
ITVNVPGHTY LPEEYVPDAD ERVLWYRRIA SAATEQAVED VRADLADKRP DMPQAAKNLL
EKARIKAYAN EHHIKTVSVT AGKLVVEPID VPRDKMTGLR RAGGRYLADK RKLSLPLRYF
KLDEGDNLLA PVAEFLEELA K
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