Gene Elen_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1289 
Symbol 
ID8415584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand- 
Start bp1545147 
End bp1545809 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID645024255 
Productendonuclease III 
Protein accessionYP_003181647 
Protein GI257791041 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00130293 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGCG AGACCATGAC CGCCAAACGC CAGCGCGCCC TTGCGGTGGC GGAGCGCATG 
AACGAGCATT ACCCCGCCGC CGAGTGCGCG CTGCACTACT GGGACGATCC GTTCCGCTTG 
ACCATCGCCG TACTGCTGAG CGCCCAAACC ACCGACAAAG GCGTGAACAA GGTCACGCCC 
GCGCTGTGGG AGCGCTACCC CACGCCCGCG GACCTCGCAG CGGCCGATGT CCGCGACGTT 
GAAGGCATCA TCCGCACCAT CGGCTTCTTC CATACGAAGG CGGCGAACGT CATCAAGTGC 
GCTCAGATGG TAGTGGCCGA CTACGGCGGC GAGATCCCGC GCGACATAGA CGAGCTGCAG 
AAGCTGCCGG GCGTGGGGCG CAAGACGGCG AACGTCGTGC TCAACGAGGC GTTCGGCATC 
GTGGAGGGCA TCGCGGTGGA CACGCACGTG TTCCGCATCG CGCATCGGTT GAAGTTCGCC 
GGCCCCTCGG CCGACACGCC AGCGAAGACC GAGGCCGCCC TGCTCAAGCT GTACCCGCGC 
GAATACTGGG GTCCCATCAA CCATCAATGG GTGCTGTTCG GCCGCGAAAC GTGCATCGCC 
CGCAACCCGA AGTGCGCGAC GTGCTTCCTG TGCGACCTCT GCCCCAGCTG CGGAAAGGCG 
TAA
 
Protein sequence
MPRETMTAKR QRALAVAERM NEHYPAAECA LHYWDDPFRL TIAVLLSAQT TDKGVNKVTP 
ALWERYPTPA DLAAADVRDV EGIIRTIGFF HTKAANVIKC AQMVVADYGG EIPRDIDELQ 
KLPGVGRKTA NVVLNEAFGI VEGIAVDTHV FRIAHRLKFA GPSADTPAKT EAALLKLYPR 
EYWGPINHQW VLFGRETCIA RNPKCATCFL CDLCPSCGKA