Gene Elen_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1277 
Symbol 
ID8415572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1535633 
End bp1536331 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content58% 
IMG OID645024244 
Productcytochrome B561 
Protein accessionYP_003181636 
Protein GI257791030 
COG category[C] Energy production and conversion 
COG ID[COG1969] Ni,Fe-hydrogenase I cytochrome b subunit 
TIGRFAM ID[TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.258136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCACT TGGCACATTA CCGCGAAGCG CATCCGATGC CCTTCGTCAT CACGCACTGG 
ATCAACCTTG TTGCGATGAT CCTCCTGATC ATCACGGGCT TCAGCATCCA CTTCCCGTTC
TGGGGCGGCT TCATGGGCAT AGCCCGCGGA GTTCATGTGT TCCTGGGCTT CGTGCTGTTC
ATCAACTGCA TCGTCCGCGT GATCATGGCT TTCTTCGTGA AGTCCGCGCC GGATGGCGGC
ACCCGCTACC AGGTCACGGA CTACAAGACG TGGCTGCCGC AGGCTGACAA CCGTCACCAG
CTGGGCGCGT GGATTCGCTA CTATCTGTTC TTCAAGAAGG ATCACCCGCT GGGCGCCAAG
CTCGGCGTGC CTCAGAAGAT CAGCTACCTG GCCATCCCCA TCCTCATCAT CGTGATGTTC
TACACGGGTC TCGCCCTGTG GGCTCCGACG ATGAACTGGG CGTTCTTTGC GGCAGGCACT
GATCTGGTGG GCGGCCTCAT GTCGATGCGC ATCATCCACT ACTTCATGAT GTACATCTTC
ATCTGCTTCA TGCTCATCCA TATCTACCTG GCGAACATCG AGGGCATCTC TCCGACGCTG
CTCATGTTCT TCTGGAAAGA GCACGGCGGT CTGGTGTACG ACCCCGAGAA GCACACCATC
GTGGGCGAGG ACGACCTCAA GCACGGCGAA AAGGCGTAA
 
Protein sequence
MAHLAHYREA HPMPFVITHW INLVAMILLI ITGFSIHFPF WGGFMGIARG VHVFLGFVLF 
INCIVRVIMA FFVKSAPDGG TRYQVTDYKT WLPQADNRHQ LGAWIRYYLF FKKDHPLGAK
LGVPQKISYL AIPILIIVMF YTGLALWAPT MNWAFFAAGT DLVGGLMSMR IIHYFMMYIF
ICFMLIHIYL ANIEGISPTL LMFFWKEHGG LVYDPEKHTI VGEDDLKHGE KA