| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1273 |
|---|
| Symbol | |
|---|
| ID | 8415568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1530788 |
|---|
| End bp | 1531366 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645024240 |
|---|
| Product | protein of unknown function DUF204 |
|---|
| Protein accession | YP_003181632 |
|---|
| Protein GI | 257791026 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1971] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.08544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTCG TGGAGCTGTT GTTGCTGGCG ATCGGTTTGT CGATGGATGC GTTCGCCGTG
TCGGTATGCA AAGGCCTGTG CATGAAGCGG CTCAACCTGC GCCAGGCGAC GGTCGTCGCG
CTGTTCTTCG GCGGCTTCCA GGCGCTCATG CCGCTTGTCG GATGGGCGCT GGGCACGCAG
TTCGAGCAGT TCATCACGCC GGTGGATCAT TGGATCGCCT TCGTGCTTTT GGCCCTCATC
GGCGGGAAGA TGCTGTGGGA CGCCTTCCAT GAGGACGACG AGGAGCTGTC CTGCCCGGCT
GACGGCAAGC TCGACCTGCG CGAGCTCGTG ATGCTCGCCG TCGCCACGAG CATCGACGCG
CTGGCCGTGG GCATCACGTT CGCGTTCTTG CGCGTGGACA TCCTCACGTC CGTGGGGCTG
ATCGGCGTCA CGACGTTCGC CCTGTCCATC GTCGGCGTTG CCGTGGGCCA CCGCTTCGGC
GCCCGCTACG AGAAGCCCGC CACCGTCGCC GGCGGCATCG TCCTCATCCT CATCGGCCTC
AAGATCCTGC TGGAACACCT GGGGATCATA GCCTTCTAG
|
|---|
| Protein sequence | MGFVELLLLA IGLSMDAFAV SVCKGLCMKR LNLRQATVVA LFFGGFQALM PLVGWALGTQ
FEQFITPVDH WIAFVLLALI GGKMLWDAFH EDDEELSCPA DGKLDLRELV MLAVATSIDA
LAVGITFAFL RVDILTSVGL IGVTTFALSI VGVAVGHRFG ARYEKPATVA GGIVLILIGL
KILLEHLGII AF
|
|---|
| |