| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1251 |
|---|
| Symbol | |
|---|
| ID | 8415544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1503543 |
|---|
| End bp | 1504901 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645024216 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_003181610 |
|---|
| Protein GI | 257791004 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACG ACTTATTCCA GCAAGCCCGG GCGGCGTACG CGCGCAAGGA CTTCCAAGGC
GCCCTGGCTG CCTACACGCA GTGCTTGCAG GATGCGGGCA GCTCGCTTGC ACCCGGCGAG
GTGGGGCTGC TGTACCACCA GATCGGCAAC TGCCTGGTCA AGCTCAAGAA CCCGAACGAG
GCCATCCACG CCTACACGCA GGCGACCGCC GATGCGGCCT ACGACGCGTG CGGCGCGGTG
AACTACAACC TCGGCATGGC CTACGCCTCG CTGCATGATT ACGAGGACGC CGTCAAGCAC
TTCGAGATCG CCGTGTCCGA CGCCAAGTAC GATGCGTCCT ACAAGGCCTA CTCGGGCATG
GGCAACGCGC TGTTGAAGCT GGGCAAGTCG GCCGAGGCCG GCGTGGCGTT TCGCGAGGCC
GCGCTCGACG AGGCCAACCC CGATCCCACG AAGGCGCTGC TCAACCTCGG CGTGTGCTTC
ATGGCGCTCG ACCGTCCGGC CGACGCCGTG GCCTCCTATG AAAGCGCGCT GCAGTTCGAC
ATGCAGCCCG ACACGCGCAA CAAGCTGTAC GCGAACCTCG GCCAGGCCTA CGTGGCCAGC
GGCCAGATGC AGAAGGCCGT GAACGCCTTC GACGAGTCCA TCGCCGACAA GACGTACTTC
CTCAGCGACT CGGCCAGCGT CGACTACCAG CGCGCAATCG CCGCGGTCGC CCAGGGCACG
TCCGAGATCA CTCAGGTGAT GGCTCCGGTG GCGCCCGTTG CCGACATGTC GGGGCTCGAC
GTGGCCGCCG ACGGCACGGC CGTGTACGTG GATCAGGATC CGTACGCGGC GGGCGGCCAG
GAACCGTACT ACTACGCCGA TCCGTACGCC CAGGCCGAGA CGAACCCCTA CGGCGCCCCG
GGCGCGGAGG ATCATTTCTT CAACGCCAGC GACGAAGAGC TGGAGCAGTG GTCGAAGGGT
CTCGCCAAGC AGGATCGCAA GCGCCGCAAC GTGGGTCTCA AGATCCTCGT CACCATCATC
CTGATCGTGC TGGTCGCTTT CGGCGCCGCC GTGTTCCTGT ACACGCAGGG CTGGGGCTAT
CCGTCGCAGG ACCAGGTGGT CGAGCAGCTG TTCTCGGATC CGAAAGCGGC CTTCGCCAGC
GAGGTGACCG AGGAGAACGC CGCGTCCATG ACCGAGCTCC TCTCGACGGT GGGCAGCCCT
GCGATCGACG GCATGGACAA GTCCATGAGC GATTCCACCG TGTACGTGAC GGCTAAGACG
CCCGAAGGCG GCGACGTGCA GTACAAGGTA TCCCTCGTGC GCAACATGAT CGGGTGGAAG
GTGTCGAACG TGGAGCTGTA CTTCCCGAGC CAGAACTGA
|
|---|
| Protein sequence | MNNDLFQQAR AAYARKDFQG ALAAYTQCLQ DAGSSLAPGE VGLLYHQIGN CLVKLKNPNE
AIHAYTQATA DAAYDACGAV NYNLGMAYAS LHDYEDAVKH FEIAVSDAKY DASYKAYSGM
GNALLKLGKS AEAGVAFREA ALDEANPDPT KALLNLGVCF MALDRPADAV ASYESALQFD
MQPDTRNKLY ANLGQAYVAS GQMQKAVNAF DESIADKTYF LSDSASVDYQ RAIAAVAQGT
SEITQVMAPV APVADMSGLD VAADGTAVYV DQDPYAAGGQ EPYYYADPYA QAETNPYGAP
GAEDHFFNAS DEELEQWSKG LAKQDRKRRN VGLKILVTII LIVLVAFGAA VFLYTQGWGY
PSQDQVVEQL FSDPKAAFAS EVTEENAASM TELLSTVGSP AIDGMDKSMS DSTVYVTAKT
PEGGDVQYKV SLVRNMIGWK VSNVELYFPS QN
|
|---|
| |