| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1237 |
|---|
| Symbol | |
|---|
| ID | 8415528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1481319 |
|---|
| End bp | 1484216 |
|---|
| Gene Length | 2898 bp |
|---|
| Protein Length | 965 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645024200 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_003181596 |
|---|
| Protein GI | 257790990 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0579] Predicted dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.18893 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.393596 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCG AACCTCTGCA GAGCATCGAC GTTGCGATCG TGGGAGCCGG CGTTGCCGGC
GCGACGACGG CGCGTGCATT GGCGCGCTGG CGTCTGAACG TCGTGGTGCT TGAGGCAGGC
AACGATGTGG CCTGCGGCGC GACGCGAGCG AACTCTGGCA TCGTGCATGC CGGCTACGAC
CCTTTGCCTG GAACGCTCAA GGCTCGCTTC AACGCGGCCG GGTCCAAGCT GTTTCCGCAA
TGGGCCGACG AGCTGGGATT CTCCTACGTC CGCAACGGCT CGCTCGTGCT CGCGTTCTCC
GATGAGGAGC TGGCCAGCAT ACGGCGCCTC GTGGCGCGCG CGGCGGAGAA CGGCGTGGAA
GGCGTGCGCG AGCTGGACGC CGCCGAAGTG CGCGCGCTCG AACCGCATGC GAGCCCGCAC
GTGCGCGGCG GCCTGCTGGC CGAGACGGGC GCCATTTGCG ACCCGTACGA GGTTGCCCTG
TTCTCGGCAG AGCAGGCGGC GCTGCACGGC ACGGCGTTCC GCTTCAACGA GCGCGTCGTG
TCCGTCGAGC GCCTGGCCGC GGGCTCGCCC TCGTCCGCGC GCTATCTGCT GTCCACCTCG
ACAGGCGCGC GGTACGCGGC GCGCGCGGTG GTGAACGCCG CCGGCGTGTT CGCCGACGAG
CTGAACAATG CCGTGAGCGC GCATCGCCTG CGCATCGCGG CGCGGCGCGG CGAGTACTGC
CTGTACGATT CCGAGTACGG CCCGCTGTTC TCGCATACCG TGTTTCAGGC GCCGTCGTCA
GCGGGCAAGG GCGTGCTCGT GACGCCCACC GTGCACGGCA ACCTGCTGGT GGGGCCGAAC
GCCGTGGAGC AGGCGAGCAA GACCGACCTG TCCACGAGCG CGGAGGGGCT GCGCTTCGTG
CTGGACGCCG CGAAGAAGAC GTGGCCCGAC GCCGGCGCGC GCGGCATGAT CGCGAACTTC
GCAGGGCTGC GCGCCTCGAA CGCCGACGGC GACGACTTCG TCATCGGCGA ACCGGACGAC
GCGCCCGGGT TCTTCAACAT CGCCTGCTTC GACTCGCCGG GGCTCACCTC GGCTCCGGCC
GTAGCCGAGC ACGTGGCGCA GGCGGTGGCG GAACAGCTGG GCGCGGAGGC GAACGGGGAA
TTCCAGGCGA GTCGCGAGCG CTGCAAGCCG TTCGCCGAGC GCGACGAGGC CGAGCGTGCG
CGCGCCATCG AGGCCGACCC GCGGTGGGGG CACATCGTGT GCCGCTGCTG CGAGGTGACC
GAGGCCGAGA TCGTGGCCGC GCTGCACGCT CCGCTGCCCG TGCTGTCGCT CGACGCGCTG
AAGTGGCGCA CGCGCGCGAT GATGGGGCGC TGCCACGGCG GGTTCTGCTC GCCGGAGATC
GCGCGCATCG TGGCGCGCGA GACGGGCGTG GCGCCCGACG TGCTGGACAA GCGCCTGCCG
GGATCGCCCG TGGTGGCCGC TTCGCGCCCC GATTACGCGG AGCTGGCGCG CAAGGGCGAG
CGGTCGGAGG CGCAGGACGC GGAGCGCGAG CGCGCGCATG TCTACGACGT GGCGGTGGCG
GGCGGCGGGG CAGCCGGCAT CGCCGCAGCC CAGGCGGCCG CGCAGCAGGG CGCGCGCGTG
CTTTTGCTCG ACCGCGAGGA GAAGCTGGGC GGCATCCTCA AGCAGTGCGT GCACAACGGG
TTCGGGCTGC ACCGCTTCGG CGTGGAGCTG ACGGGTCCCG AGTACGCGCA GCGCGAGATC
GACGCGCTTG CGGACGCGGG CTCGGTGGAC GTGCTGGCGG GTGCCAGCGT GACGTCCGTC
GATCCGGGGC GCCCGGACGA CGGAGCGCCG CTCACGGTGC ACGCGGTGGA CGCGCGCGGC
GCGCATGCCA TCGCGGCGCG CGCCGTGGTG CTGGCCACCG GCTCGCGCGA GCGCGGGCTG
GGCGCGCTCA ACCTGGCGGG CTCGCGTCCG TCGGGCGTGT TCTCGGCGGG CAGCGCGCAG
AACTTCATGA ACCTCCAAGG GTGCCTGCCC GGACGTCGCG CGGTGATCCT CGGGTCGGGA
GACATCGGGC TGATCATGGC GCGCCGTTTG GCGTCGCAGG GGGCCGAGGT GGTGGGCGTG
CACGAGCTGA TGCCGCATCC GTCCGGTCTG CGTCGCAACG TGGTGCAGTG CCTGGACGAC
TTCGGCATCC CGCTGCACCT CAGCTCCACG GTGACGCGGC TGGAAGGGGA GGGTCGCCTG
AGCGCGGTGT ACGTGTCGCA GGTGGATCCC GAGACGATCC AGGTGATCCC CGGCACCGAG
CAGCGCATCG CGTGCGACAC GCTGCTGCTG TCGGTGGGCC TCGTGCCCGA GAACGAGGTG
GCGAAGTCGG CCGGGGTGGG GCTCGATCCC GTCACCGGCG GAGCGCGGGT GGACAACCGT
TTGGCTACCG ACGTTCCCGG CGTGTTCGCC TGCGGCAACG CGCTGCACGT GCACGATCTG
GTGGACCATG CGTCGCAAGA GGGCGAGCGC GCGGGCGCCG CCGCGGCCGC TTATGCGCGG
CAGGCGGCCT CGGGCGCCTC GGCCGCGCGC GATGCGCATG TCGCCGTTCC CGTGATGGCG
GGCGAGGACG TGCGCTACGT GGTGCCGCAG AGCATCGACG CCGCCACGCC GCCCGACGAG
AAGCTCATGC TGTCGCTGCG CGTCGCGCGC ACGGTGAACG AGCCGCGCTT CGTGGTGGAG
GGGATCGACG AAGCCGGCCG GGTGCGCGAG CTGAAGCGCG CGAAGACGAT GATCGCCGTG
CCCGCCGAGA TGGTGCTCGT CGTCCTGCCC GCGGGCGCCG CGGCGGGGTG CTCGGCCGTG
CGCGTGCGCG TCGAGGGCCG CGACGAGGCC GCGCGCGTGG CCGACGAGAC CGGCATGGCC
GGAGGAGGCG CCGACTGA
|
|---|
| Protein sequence | MDTEPLQSID VAIVGAGVAG ATTARALARW RLNVVVLEAG NDVACGATRA NSGIVHAGYD
PLPGTLKARF NAAGSKLFPQ WADELGFSYV RNGSLVLAFS DEELASIRRL VARAAENGVE
GVRELDAAEV RALEPHASPH VRGGLLAETG AICDPYEVAL FSAEQAALHG TAFRFNERVV
SVERLAAGSP SSARYLLSTS TGARYAARAV VNAAGVFADE LNNAVSAHRL RIAARRGEYC
LYDSEYGPLF SHTVFQAPSS AGKGVLVTPT VHGNLLVGPN AVEQASKTDL STSAEGLRFV
LDAAKKTWPD AGARGMIANF AGLRASNADG DDFVIGEPDD APGFFNIACF DSPGLTSAPA
VAEHVAQAVA EQLGAEANGE FQASRERCKP FAERDEAERA RAIEADPRWG HIVCRCCEVT
EAEIVAALHA PLPVLSLDAL KWRTRAMMGR CHGGFCSPEI ARIVARETGV APDVLDKRLP
GSPVVAASRP DYAELARKGE RSEAQDAERE RAHVYDVAVA GGGAAGIAAA QAAAQQGARV
LLLDREEKLG GILKQCVHNG FGLHRFGVEL TGPEYAQREI DALADAGSVD VLAGASVTSV
DPGRPDDGAP LTVHAVDARG AHAIAARAVV LATGSRERGL GALNLAGSRP SGVFSAGSAQ
NFMNLQGCLP GRRAVILGSG DIGLIMARRL ASQGAEVVGV HELMPHPSGL RRNVVQCLDD
FGIPLHLSST VTRLEGEGRL SAVYVSQVDP ETIQVIPGTE QRIACDTLLL SVGLVPENEV
AKSAGVGLDP VTGGARVDNR LATDVPGVFA CGNALHVHDL VDHASQEGER AGAAAAAYAR
QAASGASAAR DAHVAVPVMA GEDVRYVVPQ SIDAATPPDE KLMLSLRVAR TVNEPRFVVE
GIDEAGRVRE LKRAKTMIAV PAEMVLVVLP AGAAAGCSAV RVRVEGRDEA ARVADETGMA
GGGAD
|
|---|
| |